STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR82422.1Hypothetical protein. (441 aa)    
Predicted Functional Partners:
APR82423.1
Cellulose-binding domain protein.
 
     0.949
APR82421.1
Hypothetical protein.
       0.785
APR76833.1
Hypothetical protein.
 
     0.782
APR77311.1
Cellulose-binding domain protein.
 
     0.782
APR85008.1
Hypothetical protein.
 
     0.782
APR78955.1
Cellulose-binding domain protein.
 
     0.780
APR86312.1
Hypothetical protein.
 
     0.780
APR80591.1
Cellulose-binding domain protein.
 
     0.777
APR85378.1
Tat (Twin-arginine translocation) pathway signal sequence domain protein.
  
     0.729
APR75814.1
Cytochrome c551 peroxidase.
  
     0.677
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.