STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR82456.1Putative transcriptional regulator. (280 aa)    
Predicted Functional Partners:
hemE
Uroporphyrinogen III decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
 
 0.994
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.
  
 0.987
APR82393.1
Uroporphyrinogen-III methyltransferase.
 
 
 0.940
APR82888.1
Porphobilinogen synthase; Belongs to the ALAD family.
  
 
 0.829
APR85249.1
Cytochrome c-type biogenesis protein CcmC.
  
    0.593
APR83848.1
Phosphoadenylyl-sulfate reductase; Reduction of activated sulfate into sulfite.
 
   
 0.581
APR77115.1
Hypothetical protein.
  
     0.572
APR76304.1
TrkA-N domain protein.
  
    0.566
APR74710.1
TrkA-N:Sodium/hydrogen exchanger.
  
    0.563
APR79486.1
Trk system potassium uptake protein TrkA.
  
    0.563
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.