STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR83428.1Hypothetical protein. (242 aa)    
Predicted Functional Partners:
APR78798.1
Polyhydroxyalkanoic acid synthase.
 
   
 0.774
APR79984.1
Polyhydroxyalkanoic acid synthase.
 
   
 0.746
APR83426.1
Putative transmembrane anti-sigma factor.
       0.552
APR83427.1
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
       0.545
APR83429.1
Vitamin B12 ABC transporter, ATPase component BtuD.
       0.530
APR82172.1
Phosphotransferase involved in threonylcarbamoyladenosine t(6)A37 formation in tRNA.
  
     0.402
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.