APR84038.1 protein (Minicystis rosea) - STRING interaction network

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Known Interactions

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experimentally determined

Predicted Interactions

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gene fusions

gene co-occurrence

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Score

APR84038.1

Putative aggregation factor core protein MAFp3, isoform C. (984 aa)

Predicted Functional Partners:

APR84039.1

0.723

APR84040.1

0.635

APR76020.1

0.611

APR79928.1

0.539

APR84041.1

0.468

APR84037.1

0.465

APR84036.1

0.420

APR78951.1

0.414

APR80888.1

0.407

APR80832.1

0.403

Your Current Organism:

Minicystis rosea

NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APR76020.1	APR80832.1	A7982_01367	A7982_06179	Hypothetical protein.	RTX toxin.	0.679
APR76020.1	APR84038.1	A7982_01367	A7982_09387	Hypothetical protein.	Putative aggregation factor core protein MAFp3, isoform C.	0.611
APR78951.1	APR84038.1	A7982_04298	A7982_09387	Integrin-like protein.	Putative aggregation factor core protein MAFp3, isoform C.	0.414
APR79928.1	APR84038.1	A7982_05275	A7982_09387	Hypothetical protein.	Putative aggregation factor core protein MAFp3, isoform C.	0.539
APR80832.1	APR76020.1	A7982_06179	A7982_01367	RTX toxin.	Hypothetical protein.	0.679
APR80832.1	APR84038.1	A7982_06179	A7982_09387	RTX toxin.	Putative aggregation factor core protein MAFp3, isoform C.	0.403
APR80888.1	APR84038.1	A7982_06235	A7982_09387	Putative O-linked GlcNAc transferase-putative TPR-containing transmembrane protein.	Putative aggregation factor core protein MAFp3, isoform C.	0.407
APR84036.1	APR84037.1	A7982_09385	A7982_09386	Hypothetical protein.	Hypothetical protein.	0.691
APR84036.1	APR84038.1	A7982_09385	A7982_09387	Hypothetical protein.	Putative aggregation factor core protein MAFp3, isoform C.	0.420
APR84037.1	APR84036.1	A7982_09386	A7982_09385	Hypothetical protein.	Hypothetical protein.	0.691
APR84037.1	APR84038.1	A7982_09386	A7982_09387	Hypothetical protein.	Putative aggregation factor core protein MAFp3, isoform C.	0.465
APR84037.1	APR84039.1	A7982_09386	A7982_09388	Hypothetical protein.	Hypothetical protein.	0.439
APR84038.1	APR76020.1	A7982_09387	A7982_01367	Putative aggregation factor core protein MAFp3, isoform C.	Hypothetical protein.	0.611
APR84038.1	APR78951.1	A7982_09387	A7982_04298	Putative aggregation factor core protein MAFp3, isoform C.	Integrin-like protein.	0.414
APR84038.1	APR79928.1	A7982_09387	A7982_05275	Putative aggregation factor core protein MAFp3, isoform C.	Hypothetical protein.	0.539
APR84038.1	APR80832.1	A7982_09387	A7982_06179	Putative aggregation factor core protein MAFp3, isoform C.	RTX toxin.	0.403
APR84038.1	APR80888.1	A7982_09387	A7982_06235	Putative aggregation factor core protein MAFp3, isoform C.	Putative O-linked GlcNAc transferase-putative TPR-containing transmembrane protein.	0.407
APR84038.1	APR84036.1	A7982_09387	A7982_09385	Putative aggregation factor core protein MAFp3, isoform C.	Hypothetical protein.	0.420
APR84038.1	APR84037.1	A7982_09387	A7982_09386	Putative aggregation factor core protein MAFp3, isoform C.	Hypothetical protein.	0.465
APR84038.1	APR84039.1	A7982_09387	A7982_09388	Putative aggregation factor core protein MAFp3, isoform C.	Hypothetical protein.	0.723

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Network Stats

number of nodes:

11

number of edges:

23

average node degree:

4.18

avg. local clustering coefficient:

0.847

expected number of edges:

11

PPI enrichment p-value:

0.00134

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0044205

De novo UMP biosynthetic process

8 of 9

2.18

5.33

8.83e-13

GO:0009084

Glutamine family amino acid biosynthetic process

5 of 6

2.15

3.55

3.51e-08

GO:0006526

Arginine biosynthetic process

4 of 4

2.23

3.01

9.76e-07

GO:0009064

Glutamine family amino acid metabolic process

6 of 19

1.73

2.84

4.04e-08

GO:0006207

De novo pyrimidine nucleobase biosynthetic process

4 of 6

2.05

2.68

2.57e-06

(more ...)

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0004088

Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity

4 of 4

2.23

2.54

1.01e-05

GO:0016879

Ligase activity, forming carbon-nitrogen bonds

6 of 29

1.55

1.97

5.32e-06

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0005951

Carbamoyl-phosphate synthase complex

2 of 2

2.23

1.21

0.0055

GO:0005737

Cytoplasm

11 of 680

0.44

0.36

0.0014

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:592

De novo UMP biosynthetic process, and Amino acid binding

9 of 12

2.1

5.76

8.89e-15

CL:595

De novo UMP biosynthetic process

6 of 7

2.16

4.12

1.41e-09

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

lkl00250

Alanine, aspartate and glutamate metabolism

6 of 13

1.89

3.29

1.48e-08

lkl00240

Pyrimidine metabolism

5 of 18

1.67

2.23

2.81e-06

lkl01100

Metabolic pathways

8 of 270

0.7

0.58

0.00057

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0005951

Carbamoyl-phosphate synthase complex

2 of 2

2.23

0.78

0.0371

GOCC:0005727

Extrachromosomal circular DNA

2 of 2

2.23

0.78

0.0371

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0665

Pyrimidine biosynthesis

7 of 10

2.07

4.44

6.20e-11

KW-0055

Arginine biosynthesis

3 of 3

2.23

1.89

0.00024

KW-0436

Ligase

5 of 52

1.21

1.11

0.00046

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF02786

Carbamoyl-phosphate synthase L chain, ATP binding domain

2 of 2

2.23

0.72

0.0470

Protein Domains (SMART)

domain

description

count in network

strength

signal

false discovery rate

SM01097

Carbamoyl-phosphate synthase small chain, CPSase domain

2 of 2

2.23

0.98

0.0149

SM01096

Carbamoyl-phosphate synthetase large chain, oligomerisation domain

2 of 2

2.23

0.98

0.0149

SM00851

MGS-like domain

2 of 2

2.23

0.98

0.0149

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