STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR84422.1Extensin-like protein. (510 aa)    
Predicted Functional Partners:
APR75199.1
Proline-rich protein.
  
     0.671
APR80304.1
GGDEF domain protein.
  
     0.656
APR84423.1
Hypothetical protein.
       0.620
APR78091.1
Hypothetical protein.
  
     0.619
APR76116.1
Gluconokinase.
 
   0.592
APR83846.1
FHA domain protein.
 
     0.592
APR83227.1
Hypothetical protein.
  
     0.587
APR84421.1
Hypothetical protein.
 
     0.578
APR84701.1
FHA domain protein.
  
     0.541
APR76099.1
Transcriptional regulatory protein algP.
  
     0.531
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.