STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR84488.1Hypothetical protein. (173 aa)    
Predicted Functional Partners:
APR84471.1
Flp pilus assembly protein RcpC/CpaB.
  
  
 0.861
APR84490.1
Hypothetical protein.
  
  
 0.820
APR84468.1
Flp pilus assembly protein TadB.
  
  
 0.805
APR84487.1
Hypothetical protein.
       0.795
APR84485.1
Hypothetical protein.
       0.759
APR84486.1
Hypothetical protein.
       0.756
APR84489.1
Hypothetical protein.
     
 0.706
APR84484.1
Hypothetical protein.
       0.633
APR77595.1
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily protein.
  
  
 0.628
APR84467.1
Type II/IV secretion system protein TadC, associated with Flp pilus assembly.
  
    0.603
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.