STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR84490.1Hypothetical protein. (59 aa)    
Predicted Functional Partners:
APR84471.1
Flp pilus assembly protein RcpC/CpaB.
  
  
 0.877
APR84488.1
Hypothetical protein.
  
  
 0.820
APR84487.1
Hypothetical protein.
  
  
 0.781
APR84470.1
Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly; Belongs to the bacterial secretin family.
  
  
 0.657
APR84468.1
Flp pilus assembly protein TadB.
  
  
 0.615
APR84489.1
Hypothetical protein.
     
 0.598
APR84467.1
Type II/IV secretion system protein TadC, associated with Flp pilus assembly.
  
  
 0.554
APR84491.1
Hypothetical protein.
       0.548
APR84485.1
Hypothetical protein.
       0.483
APR84486.1
Hypothetical protein.
       0.483
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.