STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR85031.1Transcriptional regulator, LysR family protein; Belongs to the LysR transcriptional regulatory family. (305 aa)    
Predicted Functional Partners:
APR84819.1
Transcriptional regulator, LysR family protein; Belongs to the LysR transcriptional regulatory family.
  
     0.649
APR82024.1
Transcriptional regulator, LysR family protein; Belongs to the LysR transcriptional regulatory family.
  
     0.648
APR76093.1
LysR family transcriptional regulator YnfL; Belongs to the LysR transcriptional regulatory family.
  
     0.570
APR82239.1
Transcriptional activator MetR; Belongs to the LysR transcriptional regulatory family.
  
     0.559
APR85030.1
Short-chain dehydrogenase/reductase SDR.
       0.547
APR87801.1
Transcriptional regulator, LysR family protein; Belongs to the LysR transcriptional regulatory family.
  
     0.535
APR87526.1
LysR family transcriptional regulator YbhD; Belongs to the LysR transcriptional regulatory family.
  
     0.480
APR87604.1
LysR family transcriptional regulator YbhD; Belongs to the LysR transcriptional regulatory family.
  
     0.480
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.