STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR85132.1Phenylpropionate dioxygenase. (389 aa)    
Predicted Functional Partners:
APR82710.1
3-oxosteroid 1-dehydrogenase.
  
  
 0.927
APR88213.1
Phenylpropionate dioxygenase.
  
  
 
0.921
APR75922.1
Vanillate O-demethylase oxygenase subunit protein.
  
  
 
0.912
APR75431.1
Hypothetical protein.
  
     0.717
APR81346.1
Hypothetical protein.
  
     0.716
APR77551.1
Cell division protein FtsH.
  
     0.624
APR76935.1
Hypothetical protein.
  
     0.601
APR81347.1
Sterol desaturase family protein.
  
     0.573
APR82486.1
Outer membrane protein, OmpA/MotB family protein.
  
     0.558
APR84029.1
Flagellar hook-length control protein FliK.
  
     0.549
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.