STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR85678.1Hypothetical protein. (421 aa)    
Predicted Functional Partners:
APR85679.1
WD40-like repeat protein.
 
     0.951
APR85676.1
Hypothetical protein.
 
     0.884
APR87147.1
Chemotaxis protein methyltransferase CheR.
  
 
 0.809
APR78272.1
Putative SigmaB asociated two-component system sensor protein.
  
 
 0.686
APR86528.1
Signal transduction histidine kinase.
  
 
 0.682
APR87114.1
Mobile element protein.
  
     0.651
APR77314.1
Putative SigmaB asociated two-component system sensor protein.
  
 
 0.645
APR79483.1
Two-component sensor histidine kinase.
  
 
 0.630
APR74880.1
Chemotaxis protein methyltransferase CheR.
  
 
 0.574
APR79957.1
Two-component sensor histidine kinase.
  
 
 0.574
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.