STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR86238.1Hypothetical protein. (88 aa)    
Predicted Functional Partners:
APR80224.1
Hypothetical protein.
 
     0.660
APR80722.1
Hypothetical protein.
  
     0.637
APR80235.1
Hypothetical protein.
 
     0.524
APR80233.1
IcmF-related protein.
 
    0.478
APR87698.1
Secreted protein.
 
     0.477
APR86237.1
Hypothetical protein.
       0.476
APR86353.1
Secreted protein.
 
     0.467
APR88340.1
Hypothetical protein.
 
     0.467
APR80232.1
Hypothetical protein.
 
   
 0.459
APR88485.1
Secreted protein.
 
     0.458
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.