STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR86357.1Hypothetical protein. (228 aa)    
Predicted Functional Partners:
APR86358.1
Phage protein D.
 
   0.953
APR86355.1
Hypothetical protein.
 
   0.950
APR86361.1
Hypothetical protein.
 
   0.950
APR86362.1
Hypothetical protein.
 
 
 0.946
APR86359.1
VgrG protein.
 
    0.940
APR86352.1
Hypothetical protein.
 
   0.930
APR86351.1
Phage tail sheath protein FI.
 
   0.922
APR88498.1
Hypothetical protein.
 
   0.922
APR86350.1
Phage tail sheath protein FI.
 
   0.921
APR86353.1
Secreted protein.
 
    0.906
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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