STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR86836.1Transcriptional regulator, TetR family protein. (215 aa)    
Predicted Functional Partners:
APR83285.1
Tryptophan synthase alpha chain.
  
     0.653
APR79303.1
Aldo-keto reductase, putative.
  
     0.610
APR77329.1
Hypothetical protein.
  
     0.594
APR78780.1
Transcriptional regulator, SARP family protein.
  
     0.586
APR84628.1
Hypothetical protein.
  
     0.566
APR86835.1
Hypothetical protein.
       0.565
APR75478.1
Hypothetical protein.
  
     0.553
APR85550.1
Hypothetical protein.
  
     0.532
APR85020.1
Methanol oxidation glmU-like protein.
  
     0.525
APR76179.1
Cyclohexadienyl dehydratase.
  
 
 0.444
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.