STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR86851.1Transcriptional regulator, TetR family protein. (203 aa)    
Predicted Functional Partners:
APR86849.1
Oxidoreductase, short-chain dehydrogenase/reductase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.718
APR86850.1
Hypothetical protein.
       0.718
APR86852.1
Hypothetical protein.
       0.661
APR86853.1
Hypothetical protein.
       0.656
APR76041.1
Transcriptional regulator, TetR family protein.
  
   
 0.595
APR81237.1
Transcriptional regulator, TetR family protein.
  
     0.580
APR86854.1
OmpA.
       0.573
APR79855.1
Transcriptional regulator, TetR family protein.
  
     0.511
APR75857.1
Transcriptional regulator, TetR family protein.
  
     0.503
APR80408.1
Hypothetical protein.
  
     0.407
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.