STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR87273.1Transcriptional regulator, LysR family protein; Belongs to the LysR transcriptional regulatory family. (300 aa)    
Predicted Functional Partners:
APR83387.1
Transcriptional regulator, LysR family protein; Belongs to the LysR transcriptional regulatory family.
  
     0.737
APR84819.1
Transcriptional regulator, LysR family protein; Belongs to the LysR transcriptional regulatory family.
  
     0.721
APR82239.1
Transcriptional activator MetR; Belongs to the LysR transcriptional regulatory family.
  
     0.718
APR76945.1
LysR family transcriptional regulator YeiE; Belongs to the LysR transcriptional regulatory family.
  
     0.641
APR87526.1
LysR family transcriptional regulator YbhD; Belongs to the LysR transcriptional regulatory family.
  
     0.602
APR76058.1
Hydrogen peroxide-inducible activator; Belongs to the LysR transcriptional regulatory family.
  
     0.595
APR87604.1
LysR family transcriptional regulator YbhD; Belongs to the LysR transcriptional regulatory family.
  
     0.580
APR87272.1
NADPH:quinone oxidoreductase.
       0.560
APR80782.1
Transcriptional activator MetR; Belongs to the LysR transcriptional regulatory family.
  
     0.537
APR80356.1
Hydrogen peroxide-inducible activator; Belongs to the LysR transcriptional regulatory family.
  
     0.491
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.