STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR87787.1Transcriptional regulator, AraC family protein. (343 aa)    
Predicted Functional Partners:
APR77566.1
Hypothetical protein.
 
     0.552
APR87786.1
Hypothetical protein.
       0.548
APR87601.1
Hypothetical protein.
  
     0.513
APR84901.1
DNA-binding response regulator, AraC family protein.
  
     0.499
APR81718.1
Hypothetical protein.
  
     0.463
APR75725.1
Transcriptional regulator, AraC family protein.
  
     0.454
APR82431.1
Alpha-xylosidase; Belongs to the glycosyl hydrolase 31 family.
  
     0.447
APR81546.1
Wax ester synthase/acyl-CoA:diacylglycerol acyltransferase.
  
     0.426
APR76048.1
Transcriptional regulator, AraC family protein.
  
   0.404
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.