STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR87970.1Hypothetical protein. (312 aa)    
Predicted Functional Partners:
APR76025.1
Cell surface protein.
  
 
 0.802
APR87971.1
Hypothetical protein.
       0.780
APR75320.1
Hypothetical protein.
  
     0.761
APR84845.1
Putative serine/threonine-protein kinase pknH.
  
     0.753
APR75609.1
Hypothetical protein.
  
     0.742
APR80042.1
Hypothetical protein.
  
     0.739
udk
Uridine kinase.
    
 0.739
APR78518.1
Endoglucanase.
  
     0.735
APR81702.1
Hypothetical protein.
    
 0.735
APR81703.1
Hypothetical protein.
    
 0.735
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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