STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR88331.1Hypothetical protein. (848 aa)    
Predicted Functional Partners:
APR88330.1
FHA domain containing protein.
 
     0.931
APR88332.1
Hypothetical protein.
 
     0.931
APR88336.1
Phage protein D.
 
     0.874
APR88333.1
Hypothetical protein.
 
     0.866
APR88337.1
Hypothetical protein.
 
     0.788
APR88340.1
Hypothetical protein.
 
     0.787
APR88339.1
Hypothetical protein.
 
     0.777
APR88335.1
VgrG protein.
 
     0.775
APR88329.1
Hypothetical protein.
 
     0.749
APR87709.1
NHL repeat domain protein.
 
     0.715
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.