STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR88488.1Phage tail sheath protein FI. (400 aa)    
Predicted Functional Partners:
APR88480.1
VgrG protein.
 
 
 0.937
APR88477.1
Hypothetical protein.
 
   0.933
APR88486.1
Hypothetical protein.
 
 
 0.925
APR88474.1
NHL repeat domain protein.
 
 
 0.919
APR86358.1
Phage protein D.
 
 
 0.903
APR87703.1
Phage protein D.
 
 
 0.903
APR88336.1
Phage protein D.
 
 
 0.903
APR88481.1
Hypothetical protein.
 
   0.903
APR88330.1
FHA domain containing protein.
 
 
 0.899
APR76886.1
Hypothetical protein.
 
 
 0.896
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.