STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR88571.1Transcriptional regulator, AraC family protein. (312 aa)    
Predicted Functional Partners:
APR84306.1
Transcriptional regulator, AraC family protein.
  
     0.675
APR76027.1
Transcriptional regulator, AraC family protein.
  
     0.630
APR81492.1
Transcriptional regulator, AraC family protein.
  
     0.601
APR81102.1
Transcriptional regulator, AraC family protein.
  
   
 0.586
APR88569.1
Short-chain dehydrogenase/reductase SDR.
       0.550
APR88570.1
Alcohol dehydrogenase, zinc-binding protein.
       0.550
APR82858.1
Transcriptional regulator, AraC family protein.
  
     0.497
APR87818.1
Bacterial transcription activator, effector binding protein.
  
     0.496
APR75988.1
Transcriptional regulator, AraC family protein.
  
   0.446
APR80910.1
Transcriptional regulator, AraC family protein.
  
     0.440
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.