STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFG36163.1Hypothetical protein. (235 aa)    
Predicted Functional Partners:
AFG36160.1
Hypothetical protein.
       0.773
AFG36161.1
Putative glycosyltransferase; PFAM: Glycosyl transferase family 2.
       0.773
AFG36162.1
Hypothetical protein.
       0.773
AFG36164.1
ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain; PFAM: ABC transporter transmembrane region; ABC transporter.
       0.773
AFG36155.1
Hypothetical protein.
       0.762
AFG36156.1
Hypothetical protein.
       0.762
AFG36157.1
PFAM: Glycosyl transferase family 2.
       0.762
AFG36158.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
       0.762
AFG36159.1
Hypothetical protein.
       0.762
AFG36153.1
Hypothetical protein.
       0.622
Your Current Organism:
Spirochaeta africana
NCBI taxonomy Id: 889378
Other names: S. africana DSM 8902, Spirochaeta africana DSM 8902, Spirochaeta africana Z-7692, Spirochaeta africana str. DSM 8902, Spirochaeta africana strain DSM 8902
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.