Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFG36202.1 | AFG36203.1 | Spiaf_0093 | Spiaf_0094 | Glycosyltransferase; PFAM: Glycosyl transferases group 1. | Hypothetical protein. | 0.723 |
AFG36202.1 | AFG36204.1 | Spiaf_0093 | Spiaf_0095 | Glycosyltransferase; PFAM: Glycosyl transferases group 1. | PFAM: Bacterial regulatory proteins, tetR family. | 0.455 |
AFG36202.1 | AFG36205.1 | Spiaf_0093 | Spiaf_0096 | Glycosyltransferase; PFAM: Glycosyl transferases group 1. | TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.459 |
AFG36202.1 | AFG36206.1 | Spiaf_0093 | Spiaf_0097 | Glycosyltransferase; PFAM: Glycosyl transferases group 1. | Cation/multidrug efflux pump; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.464 |
AFG36202.1 | AFG36207.1 | Spiaf_0093 | Spiaf_0098 | Glycosyltransferase; PFAM: Glycosyl transferases group 1. | Hypothetical protein. | 0.449 |
AFG36202.1 | AFG36208.1 | Spiaf_0093 | Spiaf_0099 | Glycosyltransferase; PFAM: Glycosyl transferases group 1. | PFAM: Outer membrane efflux protein. | 0.459 |
AFG36203.1 | AFG36202.1 | Spiaf_0094 | Spiaf_0093 | Hypothetical protein. | Glycosyltransferase; PFAM: Glycosyl transferases group 1. | 0.723 |
AFG36203.1 | AFG36204.1 | Spiaf_0094 | Spiaf_0095 | Hypothetical protein. | PFAM: Bacterial regulatory proteins, tetR family. | 0.476 |
AFG36203.1 | AFG36205.1 | Spiaf_0094 | Spiaf_0096 | Hypothetical protein. | TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.476 |
AFG36203.1 | AFG36206.1 | Spiaf_0094 | Spiaf_0097 | Hypothetical protein. | Cation/multidrug efflux pump; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.476 |
AFG36203.1 | AFG36207.1 | Spiaf_0094 | Spiaf_0098 | Hypothetical protein. | Hypothetical protein. | 0.476 |
AFG36203.1 | AFG36208.1 | Spiaf_0094 | Spiaf_0099 | Hypothetical protein. | PFAM: Outer membrane efflux protein. | 0.476 |
AFG36204.1 | AFG36202.1 | Spiaf_0095 | Spiaf_0093 | PFAM: Bacterial regulatory proteins, tetR family. | Glycosyltransferase; PFAM: Glycosyl transferases group 1. | 0.455 |
AFG36204.1 | AFG36203.1 | Spiaf_0095 | Spiaf_0094 | PFAM: Bacterial regulatory proteins, tetR family. | Hypothetical protein. | 0.476 |
AFG36204.1 | AFG36205.1 | Spiaf_0095 | Spiaf_0096 | PFAM: Bacterial regulatory proteins, tetR family. | TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.813 |
AFG36204.1 | AFG36206.1 | Spiaf_0095 | Spiaf_0097 | PFAM: Bacterial regulatory proteins, tetR family. | Cation/multidrug efflux pump; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.787 |
AFG36204.1 | AFG36207.1 | Spiaf_0095 | Spiaf_0098 | PFAM: Bacterial regulatory proteins, tetR family. | Hypothetical protein. | 0.779 |
AFG36204.1 | AFG36208.1 | Spiaf_0095 | Spiaf_0099 | PFAM: Bacterial regulatory proteins, tetR family. | PFAM: Outer membrane efflux protein. | 0.819 |
AFG36205.1 | AFG36202.1 | Spiaf_0096 | Spiaf_0093 | TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Glycosyltransferase; PFAM: Glycosyl transferases group 1. | 0.459 |
AFG36205.1 | AFG36203.1 | Spiaf_0096 | Spiaf_0094 | TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Hypothetical protein. | 0.476 |
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