Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFG36249.1 | AFG36250.1 | Spiaf_0140 | Spiaf_0141 | Methyl-accepting chemotaxis protein; PFAM: HAMP domain; Protein of unknown function (DUF3365); Methyl-accepting chemotaxis protein (MCP) signaling domain. | ABC-type transport system involved in cytochrome c biogenesis, permease component; PFAM: Cytochrome C assembly protein. | 0.723 |
AFG36249.1 | AFG36251.1 | Spiaf_0140 | Spiaf_0142 | Methyl-accepting chemotaxis protein; PFAM: HAMP domain; Protein of unknown function (DUF3365); Methyl-accepting chemotaxis protein (MCP) signaling domain. | Cytochrome c biogenesis factor; PFAM: ResB-like family. | 0.723 |
AFG36249.1 | AFG36252.1 | Spiaf_0140 | Spiaf_0143 | Methyl-accepting chemotaxis protein; PFAM: HAMP domain; Protein of unknown function (DUF3365); Methyl-accepting chemotaxis protein (MCP) signaling domain. | PFAM: Predicted aminopeptidase (DUF2265). | 0.534 |
AFG36249.1 | AFG36253.1 | Spiaf_0140 | Spiaf_0144 | Methyl-accepting chemotaxis protein; PFAM: HAMP domain; Protein of unknown function (DUF3365); Methyl-accepting chemotaxis protein (MCP) signaling domain. | Hypothetical protein. | 0.409 |
AFG36250.1 | AFG36249.1 | Spiaf_0141 | Spiaf_0140 | ABC-type transport system involved in cytochrome c biogenesis, permease component; PFAM: Cytochrome C assembly protein. | Methyl-accepting chemotaxis protein; PFAM: HAMP domain; Protein of unknown function (DUF3365); Methyl-accepting chemotaxis protein (MCP) signaling domain. | 0.723 |
AFG36250.1 | AFG36251.1 | Spiaf_0141 | Spiaf_0142 | ABC-type transport system involved in cytochrome c biogenesis, permease component; PFAM: Cytochrome C assembly protein. | Cytochrome c biogenesis factor; PFAM: ResB-like family. | 0.969 |
AFG36250.1 | AFG36252.1 | Spiaf_0141 | Spiaf_0143 | ABC-type transport system involved in cytochrome c biogenesis, permease component; PFAM: Cytochrome C assembly protein. | PFAM: Predicted aminopeptidase (DUF2265). | 0.569 |
AFG36250.1 | AFG36253.1 | Spiaf_0141 | Spiaf_0144 | ABC-type transport system involved in cytochrome c biogenesis, permease component; PFAM: Cytochrome C assembly protein. | Hypothetical protein. | 0.433 |
AFG36250.1 | AFG36612.1 | Spiaf_0141 | Spiaf_0509 | ABC-type transport system involved in cytochrome c biogenesis, permease component; PFAM: Cytochrome C assembly protein. | PFAM: Cytochrome C biogenesis protein transmembrane region. | 0.767 |
AFG36251.1 | AFG36249.1 | Spiaf_0142 | Spiaf_0140 | Cytochrome c biogenesis factor; PFAM: ResB-like family. | Methyl-accepting chemotaxis protein; PFAM: HAMP domain; Protein of unknown function (DUF3365); Methyl-accepting chemotaxis protein (MCP) signaling domain. | 0.723 |
AFG36251.1 | AFG36250.1 | Spiaf_0142 | Spiaf_0141 | Cytochrome c biogenesis factor; PFAM: ResB-like family. | ABC-type transport system involved in cytochrome c biogenesis, permease component; PFAM: Cytochrome C assembly protein. | 0.969 |
AFG36251.1 | AFG36252.1 | Spiaf_0142 | Spiaf_0143 | Cytochrome c biogenesis factor; PFAM: ResB-like family. | PFAM: Predicted aminopeptidase (DUF2265). | 0.569 |
AFG36251.1 | AFG36253.1 | Spiaf_0142 | Spiaf_0144 | Cytochrome c biogenesis factor; PFAM: ResB-like family. | Hypothetical protein. | 0.433 |
AFG36251.1 | AFG36612.1 | Spiaf_0142 | Spiaf_0509 | Cytochrome c biogenesis factor; PFAM: ResB-like family. | PFAM: Cytochrome C biogenesis protein transmembrane region. | 0.602 |
AFG36251.1 | AFG38642.1 | Spiaf_0142 | Spiaf_2616 | Cytochrome c biogenesis factor; PFAM: ResB-like family. | Peroxiredoxin; PFAM: AhpC/TSA family. | 0.436 |
AFG36252.1 | AFG36249.1 | Spiaf_0143 | Spiaf_0140 | PFAM: Predicted aminopeptidase (DUF2265). | Methyl-accepting chemotaxis protein; PFAM: HAMP domain; Protein of unknown function (DUF3365); Methyl-accepting chemotaxis protein (MCP) signaling domain. | 0.534 |
AFG36252.1 | AFG36250.1 | Spiaf_0143 | Spiaf_0141 | PFAM: Predicted aminopeptidase (DUF2265). | ABC-type transport system involved in cytochrome c biogenesis, permease component; PFAM: Cytochrome C assembly protein. | 0.569 |
AFG36252.1 | AFG36251.1 | Spiaf_0143 | Spiaf_0142 | PFAM: Predicted aminopeptidase (DUF2265). | Cytochrome c biogenesis factor; PFAM: ResB-like family. | 0.569 |
AFG36252.1 | AFG36253.1 | Spiaf_0143 | Spiaf_0144 | PFAM: Predicted aminopeptidase (DUF2265). | Hypothetical protein. | 0.574 |
AFG36253.1 | AFG36249.1 | Spiaf_0144 | Spiaf_0140 | Hypothetical protein. | Methyl-accepting chemotaxis protein; PFAM: HAMP domain; Protein of unknown function (DUF3365); Methyl-accepting chemotaxis protein (MCP) signaling domain. | 0.409 |
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