Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFG36485.1 | AFG36486.1 | Spiaf_0380 | Spiaf_0381 | PFAM: Predicted permease. | Putative transcriptional regulator. | 0.801 |
AFG36485.1 | AFG36487.1 | Spiaf_0380 | Spiaf_0382 | PFAM: Predicted permease. | Putative glycosyltransferase; PFAM: PilZ domain. | 0.523 |
AFG36485.1 | AFG36612.1 | Spiaf_0380 | Spiaf_0509 | PFAM: Predicted permease. | PFAM: Cytochrome C biogenesis protein transmembrane region. | 0.425 |
AFG36485.1 | AFG37374.1 | Spiaf_0380 | Spiaf_1299 | PFAM: Predicted permease. | Putative transporter component; PFAM: YeeE/YedE family (DUF395). | 0.433 |
AFG36485.1 | AFG37423.1 | Spiaf_0380 | Spiaf_1357 | PFAM: Predicted permease. | Site-specific recombinase, DNA invertase Pin; PFAM: Recombinase; Resolvase, N terminal domain. | 0.428 |
AFG36485.1 | trmB | Spiaf_0380 | Spiaf_1473 | PFAM: Predicted permease. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.501 |
AFG36486.1 | AFG36485.1 | Spiaf_0381 | Spiaf_0380 | Putative transcriptional regulator. | PFAM: Predicted permease. | 0.801 |
AFG36486.1 | AFG36487.1 | Spiaf_0381 | Spiaf_0382 | Putative transcriptional regulator. | Putative glycosyltransferase; PFAM: PilZ domain. | 0.452 |
AFG36487.1 | AFG36485.1 | Spiaf_0382 | Spiaf_0380 | Putative glycosyltransferase; PFAM: PilZ domain. | PFAM: Predicted permease. | 0.523 |
AFG36487.1 | AFG36486.1 | Spiaf_0382 | Spiaf_0381 | Putative glycosyltransferase; PFAM: PilZ domain. | Putative transcriptional regulator. | 0.452 |
AFG36612.1 | AFG36485.1 | Spiaf_0509 | Spiaf_0380 | PFAM: Cytochrome C biogenesis protein transmembrane region. | PFAM: Predicted permease. | 0.425 |
AFG36612.1 | AFG37423.1 | Spiaf_0509 | Spiaf_1357 | PFAM: Cytochrome C biogenesis protein transmembrane region. | Site-specific recombinase, DNA invertase Pin; PFAM: Recombinase; Resolvase, N terminal domain. | 0.495 |
AFG37374.1 | AFG36485.1 | Spiaf_1299 | Spiaf_0380 | Putative transporter component; PFAM: YeeE/YedE family (DUF395). | PFAM: Predicted permease. | 0.433 |
AFG37423.1 | AFG36485.1 | Spiaf_1357 | Spiaf_0380 | Site-specific recombinase, DNA invertase Pin; PFAM: Recombinase; Resolvase, N terminal domain. | PFAM: Predicted permease. | 0.428 |
AFG37423.1 | AFG36612.1 | Spiaf_1357 | Spiaf_0509 | Site-specific recombinase, DNA invertase Pin; PFAM: Recombinase; Resolvase, N terminal domain. | PFAM: Cytochrome C biogenesis protein transmembrane region. | 0.495 |
trmB | AFG36485.1 | Spiaf_1473 | Spiaf_0380 | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | PFAM: Predicted permease. | 0.501 |