Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFG36700.1 | AFG36819.1 | Spiaf_0599 | Spiaf_0720 | RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Fe2+/Zn2+ uptake regulation protein; PFAM: Ferric uptake regulator family; Belongs to the Fur family. | 0.665 |
| AFG36700.1 | AFG36944.1 | Spiaf_0599 | Spiaf_0852 | RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein; PFAM: Bacterial transcription activator, effector binding domain. | 0.635 |
| AFG36700.1 | AFG37156.1 | Spiaf_0599 | Spiaf_1069 | RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PFAM: RNA polymerase Rpb6. | 0.662 |
| AFG36700.1 | AFG38676.1 | Spiaf_0599 | Spiaf_2650 | RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | CarD-like transcriptional regulator; PFAM: CarD-like/TRCF domain. | 0.642 |
| AFG36700.1 | dnaG | Spiaf_0599 | Spiaf_1500 | RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA primase, catalytic core; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family. | 0.865 |
| AFG36700.1 | groL | Spiaf_0599 | Spiaf_0199 | RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.638 |
| AFG36700.1 | nusA | Spiaf_0599 | Spiaf_1541 | RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | 0.723 |
| AFG36700.1 | rpoA | Spiaf_0599 | Spiaf_0577 | RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.719 |
| AFG36700.1 | rpoB | Spiaf_0599 | Spiaf_0548 | RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.780 |
| AFG36700.1 | rpoC | Spiaf_0599 | Spiaf_0549 | RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase, beta'' subunit, predominant form; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.695 |
| AFG36819.1 | AFG36700.1 | Spiaf_0720 | Spiaf_0599 | Fe2+/Zn2+ uptake regulation protein; PFAM: Ferric uptake regulator family; Belongs to the Fur family. | RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.665 |
| AFG36819.1 | AFG37156.1 | Spiaf_0720 | Spiaf_1069 | Fe2+/Zn2+ uptake regulation protein; PFAM: Ferric uptake regulator family; Belongs to the Fur family. | PFAM: RNA polymerase Rpb6. | 0.617 |
| AFG36819.1 | rpoA | Spiaf_0720 | Spiaf_0577 | Fe2+/Zn2+ uptake regulation protein; PFAM: Ferric uptake regulator family; Belongs to the Fur family. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.662 |
| AFG36819.1 | rpoB | Spiaf_0720 | Spiaf_0548 | Fe2+/Zn2+ uptake regulation protein; PFAM: Ferric uptake regulator family; Belongs to the Fur family. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.626 |
| AFG36819.1 | rpoC | Spiaf_0720 | Spiaf_0549 | Fe2+/Zn2+ uptake regulation protein; PFAM: Ferric uptake regulator family; Belongs to the Fur family. | DNA-directed RNA polymerase, beta'' subunit, predominant form; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.614 |
| AFG36944.1 | AFG36700.1 | Spiaf_0852 | Spiaf_0599 | Hypothetical protein; PFAM: Bacterial transcription activator, effector binding domain. | RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.635 |
| AFG36944.1 | AFG37156.1 | Spiaf_0852 | Spiaf_1069 | Hypothetical protein; PFAM: Bacterial transcription activator, effector binding domain. | PFAM: RNA polymerase Rpb6. | 0.678 |
| AFG36944.1 | rpoA | Spiaf_0852 | Spiaf_0577 | Hypothetical protein; PFAM: Bacterial transcription activator, effector binding domain. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.764 |
| AFG36944.1 | rpoB | Spiaf_0852 | Spiaf_0548 | Hypothetical protein; PFAM: Bacterial transcription activator, effector binding domain. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.727 |
| AFG36944.1 | rpoC | Spiaf_0852 | Spiaf_0549 | Hypothetical protein; PFAM: Bacterial transcription activator, effector binding domain. | DNA-directed RNA polymerase, beta'' subunit, predominant form; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.683 |
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