STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFG36717.1Glycogen debranching enzyme; PFAM: Amylo-alpha-1,6-glucosidase; TIGRFAM: glycogen debranching enzyme, archaeal type, putative. (831 aa)    
Predicted Functional Partners:
AFG36716.1
Hypothetical protein; PFAM: Bacterial transferase hexapeptide (three repeats).
       0.773
AFG36793.1
Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.724
AFG38392.1
PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain).
 
  
 0.628
AFG36411.1
Malto-oligosyltrehalose synthase; PFAM: Alpha amylase, catalytic domain; TIGRFAM: malto-oligosyltrehalose synthase.
 
  
 0.591
AFG36718.1
Hypothetical protein.
       0.558
AFG38388.1
1,4-alpha-glucan branching enzyme; PFAM: Alpha amylase, C-terminal all-beta domain; Alpha amylase, catalytic domain.
 
  
 0.535
AFG36857.1
Glycosyltransferase; PFAM: Methyltransferase domain; Glycosyl transferases group 1.
 
 
 0.510
AFG36412.1
Malto-oligosyltrehalose trehalohydrolase; PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; Domain of unknown function (DUF3459); TIGRFAM: malto-oligosyltrehalose trehalohydrolase.
  
  
 0.430
AFG37365.1
Hypothetical protein.
  
  
 0.430
AFG37273.1
UDP-forming alpha,alpha-trehalose-phosphate synthase; PFAM: Trehalose-phosphatase; Glycosyltransferase family 20; TIGRFAM: trehalose-phosphatase; alpha,alpha-trehalose-phosphate synthase [UDP-forming]; HAD-superfamily hydrolase, subfamily IIB.
 
  
 0.428
Your Current Organism:
Spirochaeta africana
NCBI taxonomy Id: 889378
Other names: S. africana DSM 8902, Spirochaeta africana DSM 8902, Spirochaeta africana Z-7692, Spirochaeta africana str. DSM 8902, Spirochaeta africana strain DSM 8902
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