STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFG37734.1Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase; PFAM: Cytidylyltransferase. (228 aa)    
Predicted Functional Partners:
AFG37733.1
Methyltransferase family protein; PFAM: Methyltransferase domain.
 
  
 0.989
AFG37854.1
Sialic acid synthase; PFAM: SAF domain; NeuB family.
 
  
 0.912
AFG37735.1
Hypothetical protein.
   
 
 0.835
AFG37732.1
Biotin carboxylase; PFAM: D-ala D-ala ligase C-terminus.
 
     0.832
AFG37736.1
Hypothetical protein.
  
    0.810
AFG37731.1
PFAM: N-acetylmuramoyl-L-alanine amidase.
       0.808
AFG37730.1
Sporulation/spore germination protein; PFAM: Sporulation and spore germination.
       0.807
AFG38180.1
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.742
AFG38257.1
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.697
AFG36870.1
PFAM: Protein of unknown function DUF115.
 
     0.677
Your Current Organism:
Spirochaeta africana
NCBI taxonomy Id: 889378
Other names: S. africana DSM 8902, Spirochaeta africana DSM 8902, Spirochaeta africana Z-7692, Spirochaeta africana str. DSM 8902, Spirochaeta africana strain DSM 8902
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.