STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFG37748.1Ankyrin repeat-containing protein; PFAM: Ankyrin repeat. (303 aa)    
Predicted Functional Partners:
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.804
AFG38686.1
Tfp pilus assembly protein PilF; PFAM: Tetratricopeptide repeat.
 
 0.788
AFG38634.1
Ankyrin repeat-containing protein.
  
     0.775
AFG36725.1
Ankyrin repeat-containing protein.
  
     0.772
AFG37514.1
Putative N-acetylglucosaminyl transferase; PFAM: Tetratricopeptide repeat.
  
 0.756
AFG37240.1
PFAM: Tetratricopeptide repeat.
  
 0.744
AFG38777.1
PFAM: Tetratricopeptide repeat.
 
 0.738
AFG38732.1
PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD.
    
 0.731
AFG38645.1
Leucine Rich Repeat (LRR)-containing protein.
  
 0.725
AFG38269.1
Putative transcriptional regulator; PFAM: Bacterial transcriptional activator domain.
  
 0.723
Your Current Organism:
Spirochaeta africana
NCBI taxonomy Id: 889378
Other names: S. africana DSM 8902, Spirochaeta africana DSM 8902, Spirochaeta africana Z-7692, Spirochaeta africana str. DSM 8902, Spirochaeta africana strain DSM 8902
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.