STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFG38083.1ABC-type transport system involved in resistance to organic solvents, permease component; PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein. (258 aa)    
Predicted Functional Partners:
AFG38081.1
ABC-type transport system involved in resistance to organic solvents, periplasmic component; PFAM: mce related protein.
 
 0.996
AFG38082.1
ABC-type transport system involved in resistance to organic solvents, ATPase component; PFAM: ABC transporter.
 
 0.996
AFG36604.1
ABC-type transport system involved in resistance to organic solvents, ATPase component; PFAM: ABC transporter.
 
 0.991
AFG36607.1
ABC-type transport system involved in resistance to organic solvents, periplasmic component; PFAM: mce related protein.
 
 0.974
AFG36605.1
PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; Belongs to the MlaE permease family.
 
0.950
AFG38080.1
Hypothetical protein.
       0.806
AFG37997.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region.
 
 
 0.614
AFG38017.1
Biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel family.
  
   
 0.608
AFG37277.1
PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
   
   0.602
AFG38407.1
Hypothetical protein.
   
   0.602
Your Current Organism:
Spirochaeta africana
NCBI taxonomy Id: 889378
Other names: S. africana DSM 8902, Spirochaeta africana DSM 8902, Spirochaeta africana Z-7692, Spirochaeta africana str. DSM 8902, Spirochaeta africana strain DSM 8902
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.