Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFG38400.1 | AFG38401.1 | Spiaf_2368 | Spiaf_2369 | ABC-type Mn2+/Zn2+ transport system, permease component; PFAM: ABC 3 transport family. | ATPase component of Mn/Zn ABC-type transporter; PFAM: ABC transporter. | 0.995 |
AFG38400.1 | AFG38402.1 | Spiaf_2368 | Spiaf_2370 | ABC-type Mn2+/Zn2+ transport system, permease component; PFAM: ABC 3 transport family. | ABC-type metal ion transport system, periplasmic component/surface adhesin; PFAM: Periplasmic solute binding protein family; Belongs to the bacterial solute-binding protein 9 family. | 0.989 |
AFG38400.1 | AFG38403.1 | Spiaf_2368 | Spiaf_2371 | ABC-type Mn2+/Zn2+ transport system, permease component; PFAM: ABC 3 transport family. | Hypothetical protein. | 0.521 |
AFG38401.1 | AFG38400.1 | Spiaf_2369 | Spiaf_2368 | ATPase component of Mn/Zn ABC-type transporter; PFAM: ABC transporter. | ABC-type Mn2+/Zn2+ transport system, permease component; PFAM: ABC 3 transport family. | 0.995 |
AFG38401.1 | AFG38402.1 | Spiaf_2369 | Spiaf_2370 | ATPase component of Mn/Zn ABC-type transporter; PFAM: ABC transporter. | ABC-type metal ion transport system, periplasmic component/surface adhesin; PFAM: Periplasmic solute binding protein family; Belongs to the bacterial solute-binding protein 9 family. | 0.984 |
AFG38401.1 | AFG38403.1 | Spiaf_2369 | Spiaf_2371 | ATPase component of Mn/Zn ABC-type transporter; PFAM: ABC transporter. | Hypothetical protein. | 0.521 |
AFG38402.1 | AFG38400.1 | Spiaf_2370 | Spiaf_2368 | ABC-type metal ion transport system, periplasmic component/surface adhesin; PFAM: Periplasmic solute binding protein family; Belongs to the bacterial solute-binding protein 9 family. | ABC-type Mn2+/Zn2+ transport system, permease component; PFAM: ABC 3 transport family. | 0.989 |
AFG38402.1 | AFG38401.1 | Spiaf_2370 | Spiaf_2369 | ABC-type metal ion transport system, periplasmic component/surface adhesin; PFAM: Periplasmic solute binding protein family; Belongs to the bacterial solute-binding protein 9 family. | ATPase component of Mn/Zn ABC-type transporter; PFAM: ABC transporter. | 0.984 |
AFG38402.1 | AFG38403.1 | Spiaf_2370 | Spiaf_2371 | ABC-type metal ion transport system, periplasmic component/surface adhesin; PFAM: Periplasmic solute binding protein family; Belongs to the bacterial solute-binding protein 9 family. | Hypothetical protein. | 0.548 |
AFG38403.1 | AFG38400.1 | Spiaf_2371 | Spiaf_2368 | Hypothetical protein. | ABC-type Mn2+/Zn2+ transport system, permease component; PFAM: ABC 3 transport family. | 0.521 |
AFG38403.1 | AFG38401.1 | Spiaf_2371 | Spiaf_2369 | Hypothetical protein. | ATPase component of Mn/Zn ABC-type transporter; PFAM: ABC transporter. | 0.521 |
AFG38403.1 | AFG38402.1 | Spiaf_2371 | Spiaf_2370 | Hypothetical protein. | ABC-type metal ion transport system, periplasmic component/surface adhesin; PFAM: Periplasmic solute binding protein family; Belongs to the bacterial solute-binding protein 9 family. | 0.548 |