Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFG37009.1 | AFG38530.1 | Spiaf_0920 | Spiaf_2499 | PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family. | PFAM: Mechanosensitive ion channel. | 0.479 |
AFG38529.1 | AFG38530.1 | Spiaf_2498 | Spiaf_2499 | PFAM: DJ-1/PfpI family; TIGRFAM: DJ-1 family protein. | PFAM: Mechanosensitive ion channel. | 0.783 |
AFG38529.1 | AFG38531.1 | Spiaf_2498 | Spiaf_2500 | PFAM: DJ-1/PfpI family; TIGRFAM: DJ-1 family protein. | Hypothetical protein. | 0.757 |
AFG38529.1 | AFG38532.1 | Spiaf_2498 | Spiaf_2501 | PFAM: DJ-1/PfpI family; TIGRFAM: DJ-1 family protein. | PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain. | 0.537 |
AFG38530.1 | AFG37009.1 | Spiaf_2499 | Spiaf_0920 | PFAM: Mechanosensitive ion channel. | PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family. | 0.479 |
AFG38530.1 | AFG38529.1 | Spiaf_2499 | Spiaf_2498 | PFAM: Mechanosensitive ion channel. | PFAM: DJ-1/PfpI family; TIGRFAM: DJ-1 family protein. | 0.783 |
AFG38530.1 | AFG38531.1 | Spiaf_2499 | Spiaf_2500 | PFAM: Mechanosensitive ion channel. | Hypothetical protein. | 0.794 |
AFG38530.1 | AFG38532.1 | Spiaf_2499 | Spiaf_2501 | PFAM: Mechanosensitive ion channel. | PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain. | 0.617 |
AFG38531.1 | AFG38529.1 | Spiaf_2500 | Spiaf_2498 | Hypothetical protein. | PFAM: DJ-1/PfpI family; TIGRFAM: DJ-1 family protein. | 0.757 |
AFG38531.1 | AFG38530.1 | Spiaf_2500 | Spiaf_2499 | Hypothetical protein. | PFAM: Mechanosensitive ion channel. | 0.794 |
AFG38531.1 | AFG38532.1 | Spiaf_2500 | Spiaf_2501 | Hypothetical protein. | PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain. | 0.548 |
AFG38532.1 | AFG38529.1 | Spiaf_2501 | Spiaf_2498 | PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain. | PFAM: DJ-1/PfpI family; TIGRFAM: DJ-1 family protein. | 0.537 |
AFG38532.1 | AFG38530.1 | Spiaf_2501 | Spiaf_2499 | PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain. | PFAM: Mechanosensitive ion channel. | 0.617 |
AFG38532.1 | AFG38531.1 | Spiaf_2501 | Spiaf_2500 | PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain. | Hypothetical protein. | 0.548 |