node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFG37574.1 | AFG38095.1 | Spiaf_1515 | Spiaf_2047 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | PFAM: DbpA RNA binding domain. | 0.641 |
AFG37574.1 | AFG38204.1 | Spiaf_1515 | Spiaf_2167 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | PFAM: 3'-5' exonuclease; HRDC domain. | 0.883 |
AFG37574.1 | AFG38649.1 | Spiaf_1515 | Spiaf_2623 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | PFAM: Helicase conserved C-terminal domain; ATP-dependent helicase C-terminal; Helicase associated domain (HA2); DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpB. | 0.788 |
AFG37574.1 | AFG38732.1 | Spiaf_1515 | Spiaf_2707 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD. | 0.879 |
AFG37574.1 | rpsD | Spiaf_1515 | Spiaf_1720 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Ribosomal protein S4, bacterial/organelle type; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.988 |
AFG37574.1 | rpsK | Spiaf_1515 | Spiaf_0576 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.987 |
AFG38095.1 | AFG37574.1 | Spiaf_2047 | Spiaf_1515 | PFAM: DbpA RNA binding domain. | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.641 |
AFG38095.1 | AFG38204.1 | Spiaf_2047 | Spiaf_2167 | PFAM: DbpA RNA binding domain. | PFAM: 3'-5' exonuclease; HRDC domain. | 0.503 |
AFG38095.1 | AFG38645.1 | Spiaf_2047 | Spiaf_2619 | PFAM: DbpA RNA binding domain. | Leucine Rich Repeat (LRR)-containing protein. | 0.657 |
AFG38095.1 | AFG38649.1 | Spiaf_2047 | Spiaf_2623 | PFAM: DbpA RNA binding domain. | PFAM: Helicase conserved C-terminal domain; ATP-dependent helicase C-terminal; Helicase associated domain (HA2); DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpB. | 0.697 |
AFG38095.1 | AFG38732.1 | Spiaf_2047 | Spiaf_2707 | PFAM: DbpA RNA binding domain. | PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD. | 0.831 |
AFG38095.1 | rpsD | Spiaf_2047 | Spiaf_1720 | PFAM: DbpA RNA binding domain. | Ribosomal protein S4, bacterial/organelle type; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.696 |
AFG38095.1 | rpsK | Spiaf_2047 | Spiaf_0576 | PFAM: DbpA RNA binding domain. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.548 |
AFG38204.1 | AFG37574.1 | Spiaf_2167 | Spiaf_1515 | PFAM: 3'-5' exonuclease; HRDC domain. | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.883 |
AFG38204.1 | AFG38095.1 | Spiaf_2167 | Spiaf_2047 | PFAM: 3'-5' exonuclease; HRDC domain. | PFAM: DbpA RNA binding domain. | 0.503 |
AFG38204.1 | AFG38649.1 | Spiaf_2167 | Spiaf_2623 | PFAM: 3'-5' exonuclease; HRDC domain. | PFAM: Helicase conserved C-terminal domain; ATP-dependent helicase C-terminal; Helicase associated domain (HA2); DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpB. | 0.826 |
AFG38204.1 | AFG38732.1 | Spiaf_2167 | Spiaf_2707 | PFAM: 3'-5' exonuclease; HRDC domain. | PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD. | 0.685 |
AFG38204.1 | rpsD | Spiaf_2167 | Spiaf_1720 | PFAM: 3'-5' exonuclease; HRDC domain. | Ribosomal protein S4, bacterial/organelle type; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.785 |
AFG38204.1 | rpsK | Spiaf_2167 | Spiaf_0576 | PFAM: 3'-5' exonuclease; HRDC domain. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.756 |
AFG38645.1 | AFG38095.1 | Spiaf_2619 | Spiaf_2047 | Leucine Rich Repeat (LRR)-containing protein. | PFAM: DbpA RNA binding domain. | 0.657 |