node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFG37574.1 | AFG38076.1 | Spiaf_1515 | Spiaf_2027 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); DEAD/DEAH box helicase; Domain of unknown function (DUF1605); TIGRFAM: ATP-dependent helicase HrpA. | 0.788 |
AFG37574.1 | AFG38125.1 | Spiaf_1515 | Spiaf_2077 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Molecular chaperone; PFAM: Hsp70 protein; Belongs to the heat shock protein 70 family. | 0.570 |
AFG37574.1 | AFG38649.1 | Spiaf_1515 | Spiaf_2623 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | PFAM: Helicase conserved C-terminal domain; ATP-dependent helicase C-terminal; Helicase associated domain (HA2); DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpB. | 0.788 |
AFG37574.1 | AFG38732.1 | Spiaf_1515 | Spiaf_2707 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD. | 0.879 |
AFG37574.1 | AFG38759.1 | Spiaf_1515 | Spiaf_2735 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | PFAM: Hsp70 protein. | 0.604 |
AFG37574.1 | dnaK | Spiaf_1515 | Spiaf_1960 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.570 |
AFG37574.1 | infA | Spiaf_1515 | Spiaf_2529 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | 0.424 |
AFG37574.1 | rplC | Spiaf_1515 | Spiaf_0554 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 50S ribosomal protein L3, bacterial; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.974 |
AFG37574.1 | rplM | Spiaf_1515 | Spiaf_0665 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Ribosomal protein L13, bacterial type; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.967 |
AFG38076.1 | AFG37574.1 | Spiaf_2027 | Spiaf_1515 | PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); DEAD/DEAH box helicase; Domain of unknown function (DUF1605); TIGRFAM: ATP-dependent helicase HrpA. | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.788 |
AFG38076.1 | AFG38732.1 | Spiaf_2027 | Spiaf_2707 | PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); DEAD/DEAH box helicase; Domain of unknown function (DUF1605); TIGRFAM: ATP-dependent helicase HrpA. | PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD. | 0.875 |
AFG38125.1 | AFG37574.1 | Spiaf_2077 | Spiaf_1515 | Molecular chaperone; PFAM: Hsp70 protein; Belongs to the heat shock protein 70 family. | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.570 |
AFG38125.1 | AFG38732.1 | Spiaf_2077 | Spiaf_2707 | Molecular chaperone; PFAM: Hsp70 protein; Belongs to the heat shock protein 70 family. | PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD. | 0.927 |
AFG38125.1 | dnaK | Spiaf_2077 | Spiaf_1960 | Molecular chaperone; PFAM: Hsp70 protein; Belongs to the heat shock protein 70 family. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.910 |
AFG38125.1 | htpG | Spiaf_2077 | Spiaf_2634 | Molecular chaperone; PFAM: Hsp70 protein; Belongs to the heat shock protein 70 family. | Molecular chaperone of HSP90 family; Molecular chaperone. Has ATPase activity. | 0.935 |
AFG38125.1 | rplC | Spiaf_2077 | Spiaf_0554 | Molecular chaperone; PFAM: Hsp70 protein; Belongs to the heat shock protein 70 family. | 50S ribosomal protein L3, bacterial; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.640 |
AFG38125.1 | rplM | Spiaf_2077 | Spiaf_0665 | Molecular chaperone; PFAM: Hsp70 protein; Belongs to the heat shock protein 70 family. | Ribosomal protein L13, bacterial type; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.702 |
AFG38649.1 | AFG37574.1 | Spiaf_2623 | Spiaf_1515 | PFAM: Helicase conserved C-terminal domain; ATP-dependent helicase C-terminal; Helicase associated domain (HA2); DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpB. | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.788 |
AFG38649.1 | AFG38732.1 | Spiaf_2623 | Spiaf_2707 | PFAM: Helicase conserved C-terminal domain; ATP-dependent helicase C-terminal; Helicase associated domain (HA2); DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpB. | PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD. | 0.875 |
AFG38732.1 | AFG37574.1 | Spiaf_2707 | Spiaf_1515 | PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD. | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.879 |