Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFG36929.1 | AFG36931.1 | Spiaf_0836 | Spiaf_0839 | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | TIGRFAM: PAS domain S-box. | 0.578 |
AFG36929.1 | AFG36943.1 | Spiaf_0836 | Spiaf_0851 | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | 0.580 |
AFG36929.1 | AFG37868.1 | Spiaf_0836 | Spiaf_1811 | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | PFAM: EAL domain; Response regulator receiver domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. | 0.819 |
AFG36929.1 | AFG38736.1 | Spiaf_0836 | Spiaf_2711 | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | PFAM: Domain of unknown function (DUF1987). | 0.526 |
AFG36929.1 | AFG38738.1 | Spiaf_0836 | Spiaf_2713 | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | Serine phosphatase RsbU, regulator of sigma subunit; PFAM: 7TM diverse intracellular signalling; Stage II sporulation protein E (SpoIIE). | 0.519 |
AFG36931.1 | AFG36929.1 | Spiaf_0839 | Spiaf_0836 | TIGRFAM: PAS domain S-box. | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | 0.578 |
AFG36931.1 | AFG36943.1 | Spiaf_0839 | Spiaf_0851 | TIGRFAM: PAS domain S-box. | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | 0.669 |
AFG36931.1 | AFG37868.1 | Spiaf_0839 | Spiaf_1811 | TIGRFAM: PAS domain S-box. | PFAM: EAL domain; Response regulator receiver domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. | 0.860 |
AFG36931.1 | AFG38736.1 | Spiaf_0839 | Spiaf_2711 | TIGRFAM: PAS domain S-box. | PFAM: Domain of unknown function (DUF1987). | 0.552 |
AFG36943.1 | AFG36929.1 | Spiaf_0851 | Spiaf_0836 | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | 0.580 |
AFG36943.1 | AFG36931.1 | Spiaf_0851 | Spiaf_0839 | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | TIGRFAM: PAS domain S-box. | 0.669 |
AFG36943.1 | AFG37366.1 | Spiaf_0851 | Spiaf_1291 | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | PFAM: 7TM diverse intracellular signalling; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | 0.589 |
AFG36943.1 | AFG37868.1 | Spiaf_0851 | Spiaf_1811 | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | PFAM: EAL domain; Response regulator receiver domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. | 0.933 |
AFG36943.1 | AFG38393.1 | Spiaf_0851 | Spiaf_2361 | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | PFAM: Stage II sporulation protein E (SpoIIE). | 0.402 |
AFG36943.1 | AFG38734.1 | Spiaf_0851 | Spiaf_2709 | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | 0.446 |
AFG36943.1 | AFG38736.1 | Spiaf_0851 | Spiaf_2711 | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | PFAM: Domain of unknown function (DUF1987). | 0.526 |
AFG36943.1 | AFG38737.1 | Spiaf_0851 | Spiaf_2712 | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | PFAM: Adenylate and Guanylate cyclase catalytic domain. | 0.425 |
AFG36943.1 | AFG38738.1 | Spiaf_0851 | Spiaf_2713 | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | Serine phosphatase RsbU, regulator of sigma subunit; PFAM: 7TM diverse intracellular signalling; Stage II sporulation protein E (SpoIIE). | 0.402 |
AFG37366.1 | AFG36943.1 | Spiaf_1291 | Spiaf_0851 | PFAM: 7TM diverse intracellular signalling; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | 0.589 |
AFG37366.1 | AFG37868.1 | Spiaf_1291 | Spiaf_1811 | PFAM: 7TM diverse intracellular signalling; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | PFAM: EAL domain; Response regulator receiver domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. | 0.816 |
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