STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFG38869.1PFAM: Calcineurin-like phosphoesterase. (314 aa)    
Predicted Functional Partners:
AFG38732.1
PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD.
   
 0.839
AFG38871.1
Hypothetical protein.
  
  
 0.789
AFG38645.1
Leucine Rich Repeat (LRR)-containing protein.
    
 0.784
AFG38870.1
PFAM: Protein kinase domain.
     
 0.765
AFG38042.1
WD40 repeat-containing protein; PFAM: WD domain, G-beta repeat.
   
 0.759
AFG38872.1
PFAM: von Willebrand factor type A domain.
       0.738
AFG38542.1
Putative hydrolase or acyltransferase of alpha/beta superfamily; PFAM: Bacterial regulatory proteins, luxR family.
   
 0.691
AFG38873.1
Putative membrane protein; PFAM: YhhN-like protein.
       0.689
AFG36725.1
Ankyrin repeat-containing protein.
   
 0.676
AFG37204.1
Hypothetical protein.
   
 0.676
Your Current Organism:
Spirochaeta africana
NCBI taxonomy Id: 889378
Other names: S. africana DSM 8902, Spirochaeta africana DSM 8902, Spirochaeta africana Z-7692, Spirochaeta africana str. DSM 8902, Spirochaeta africana strain DSM 8902
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.