Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB32097.1 | SKB88114.1 | SAMN03080601_00186 | SAMN03080601_01426 | Oxidoreductase family, NAD-binding Rossmann fold. | Oxidoreductase family, NAD-binding Rossmann fold. | 0.595 |
SKB32097.1 | SKC19083.1 | SAMN03080601_00186 | SAMN03080601_02240 | Oxidoreductase family, NAD-binding Rossmann fold. | Protein of unknown function. | 0.724 |
SKB32097.1 | SKC22092.1 | SAMN03080601_00186 | SAMN03080601_02507 | Oxidoreductase family, NAD-binding Rossmann fold. | Predicted dehydrogenase. | 0.456 |
SKB32097.1 | SKC22099.1 | SAMN03080601_00186 | SAMN03080601_02508 | Oxidoreductase family, NAD-binding Rossmann fold. | Sugar phosphate isomerase/epimerase. | 0.789 |
SKB32097.1 | SKC22110.1 | SAMN03080601_00186 | SAMN03080601_02510 | Oxidoreductase family, NAD-binding Rossmann fold. | Predicted dehydrogenase. | 0.754 |
SKB32097.1 | SKC22115.1 | SAMN03080601_00186 | SAMN03080601_02511 | Oxidoreductase family, NAD-binding Rossmann fold. | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | 0.611 |
SKB35049.1 | SKB88101.1 | SAMN03080601_00291 | SAMN03080601_01425 | Inosine-uridine nucleoside N-ribohydrolase. | Tat (twin-arginine translocation) pathway signal sequence. | 0.410 |
SKB35049.1 | SKB88114.1 | SAMN03080601_00291 | SAMN03080601_01426 | Inosine-uridine nucleoside N-ribohydrolase. | Oxidoreductase family, NAD-binding Rossmann fold. | 0.563 |
SKB35049.1 | SKC19083.1 | SAMN03080601_00291 | SAMN03080601_02240 | Inosine-uridine nucleoside N-ribohydrolase. | Protein of unknown function. | 0.712 |
SKB35049.1 | SKC22099.1 | SAMN03080601_00291 | SAMN03080601_02508 | Inosine-uridine nucleoside N-ribohydrolase. | Sugar phosphate isomerase/epimerase. | 0.664 |
SKB35049.1 | SKC22107.1 | SAMN03080601_00291 | SAMN03080601_02509 | Inosine-uridine nucleoside N-ribohydrolase. | Predicted dehydrogenase. | 0.572 |
SKB35049.1 | SKC22110.1 | SAMN03080601_00291 | SAMN03080601_02510 | Inosine-uridine nucleoside N-ribohydrolase. | Predicted dehydrogenase. | 0.705 |
SKB35049.1 | SKC22115.1 | SAMN03080601_00291 | SAMN03080601_02511 | Inosine-uridine nucleoside N-ribohydrolase. | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | 0.530 |
SKB88101.1 | SKB35049.1 | SAMN03080601_01425 | SAMN03080601_00291 | Tat (twin-arginine translocation) pathway signal sequence. | Inosine-uridine nucleoside N-ribohydrolase. | 0.410 |
SKB88101.1 | SKB88114.1 | SAMN03080601_01425 | SAMN03080601_01426 | Tat (twin-arginine translocation) pathway signal sequence. | Oxidoreductase family, NAD-binding Rossmann fold. | 0.870 |
SKB88101.1 | SKC19083.1 | SAMN03080601_01425 | SAMN03080601_02240 | Tat (twin-arginine translocation) pathway signal sequence. | Protein of unknown function. | 0.561 |
SKB88101.1 | SKC22099.1 | SAMN03080601_01425 | SAMN03080601_02508 | Tat (twin-arginine translocation) pathway signal sequence. | Sugar phosphate isomerase/epimerase. | 0.694 |
SKB88101.1 | SKC22110.1 | SAMN03080601_01425 | SAMN03080601_02510 | Tat (twin-arginine translocation) pathway signal sequence. | Predicted dehydrogenase. | 0.729 |
SKB88114.1 | SKB32097.1 | SAMN03080601_01426 | SAMN03080601_00186 | Oxidoreductase family, NAD-binding Rossmann fold. | Oxidoreductase family, NAD-binding Rossmann fold. | 0.595 |
SKB88114.1 | SKB35049.1 | SAMN03080601_01426 | SAMN03080601_00291 | Oxidoreductase family, NAD-binding Rossmann fold. | Inosine-uridine nucleoside N-ribohydrolase. | 0.563 |
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