STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC22099.1Sugar phosphate isomerase/epimerase. (281 aa)    
Predicted Functional Partners:
SKC22107.1
Predicted dehydrogenase.
 
  
 0.927
SKC22110.1
Predicted dehydrogenase.
 
  
 0.921
SKB32097.1
Oxidoreductase family, NAD-binding Rossmann fold.
 
  
 0.789
SKC22115.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
    0.774
SKB88114.1
Oxidoreductase family, NAD-binding Rossmann fold.
 
  
 0.770
SKC23425.1
Tat (twin-arginine translocation) pathway signal sequence.
 
  
 0.763
SKB88101.1
Tat (twin-arginine translocation) pathway signal sequence.
 
  
 0.694
SKC19083.1
Protein of unknown function.
 
     0.681
SKC22092.1
Predicted dehydrogenase.
 
  
 0.681
SKB35049.1
Inosine-uridine nucleoside N-ribohydrolase.
  
   
 0.664
Your Current Organism:
Alkalitalea saponilacus
NCBI taxonomy Id: 889453
Other names: A. saponilacus, ATCC BAA-2172, Alkalitalea saponilacus Zhao and Chen 2012, Bacteroidales bacterium SC/BZ-SP2, DSM 24412, strain SC/BZ-SP2
Server load: low (18%) [HD]