STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV40110.1Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB. (208 aa)    
Predicted Functional Partners:
SFV40111.1
Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC.
 
 0.999
SFV40109.1
Osmotically activated L-carnitine/choline ABC transporter, ATP-binding protein OpuCA.
 0.997
SFV40112.1
Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCD.
 
 
0.985
SFV41733.1
L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1).
 0.983
SFV41734.1
L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation.
 
 
0.954
SFV40113.1
UDP-galactose:(galactosyl) LPS alpha1,2-galactosyltransferase WaaW.
       0.576
SFV40114.1
Hypothetical protein.
       0.576
SFV41366.1
Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC.
 
  
 0.499
SFV41669.1
Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC.
 
  
 0.499
Your Current Organism:
Lactobacillus acidipiscis
NCBI taxonomy Id: 89059
Other names: CCUG 42961 [[Lactobacillus cypricasei]], CCUG 46556, CIP 106393 [[Lactobacillus cypricasei]], CIP 106750, DSM 15353 [[Lactobacillus cypricasei]], DSM 15836, JCM 10692, KCTC 13900 [[Lactobacillus cypricasei]], L. acidipiscis, Lactobacillus acidipiscis Tanasupawat et al. 2000, Lactobacillus cypricasei, Lactobacillus cypricasei Lawson et al. 2001, Lactobacillus sp. FS60-1, Lactobacillus sp. FS60-1T, Lactobacillus sp. LMG 17676, Lactobacillus sp. LMK3, NBRC 102163, NRIC 0300, PCU 207, PCU:207, strain FS60-1, strain LMK3 [[Lactobacillus cypricasei]]
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