STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV40119.1D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. (444 aa)    
Predicted Functional Partners:
SFV40375.1
Multimodular transpeptidase-transglycosylase.
  
 
 0.918
SFV40686.1
Multimodular transpeptidase-transglycosylase / Penicillin-binding protein 1A/1B (PBP1).
  
 
 0.918
SFV40117.1
Osmosensitive K+ channel histidine kinase KdpD.
  
  
 0.671
SFV40116.1
Phosphate regulon transcriptional regulatory protein PhoB (SphR).
  
  
 0.656
SFV40118.1
Hypothetical protein.
       0.533
SFV40639.1
Carboxyl-terminal protease; Belongs to the peptidase S41A family.
 
 
 0.525
SFV41370.1
Putative secreted protein.
  
  
 0.503
SFV41505.1
Cell division protein FtsI [Peptidoglycan synthetase].
  
 0.485
rlmH
LSU m3Psi1915 methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
 
  
 0.478
SFV40807.1
Cell division protein FtsI [Peptidoglycan synthetase].
  
 0.474
Your Current Organism:
Lactobacillus acidipiscis
NCBI taxonomy Id: 89059
Other names: CCUG 42961 [[Lactobacillus cypricasei]], CCUG 46556, CIP 106393 [[Lactobacillus cypricasei]], CIP 106750, DSM 15353 [[Lactobacillus cypricasei]], DSM 15836, JCM 10692, KCTC 13900 [[Lactobacillus cypricasei]], L. acidipiscis, Lactobacillus acidipiscis Tanasupawat et al. 2000, Lactobacillus cypricasei, Lactobacillus cypricasei Lawson et al. 2001, Lactobacillus sp. FS60-1, Lactobacillus sp. FS60-1T, Lactobacillus sp. LMG 17676, Lactobacillus sp. LMK3, NBRC 102163, NRIC 0300, PCU 207, PCU:207, strain FS60-1, strain LMK3 [[Lactobacillus cypricasei]]
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