STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV40413.1Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1). (244 aa)    
Predicted Functional Partners:
LAC1533_0084
Amino acid ABC transporter, permease protein.
 
 0.984
SFV39612.1
Amino acid ABC transporter, amino acid-binding/permease protein.
 
 0.957
SFV41247.1
Glutamate transport membrane-spanning protein.
 
 0.947
SFV41248.1
Glutamate transport membrane-spanning protein.
 
 0.945
SFV41538.1
ABC transporter membrane-spanning permease-glutamine transport.
 
 0.941
SFV41490.1
/ Glutamine transport system permease protein GlnP (TC 3.A.1.3.2).
 
 0.925
SFV41241.1
Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1).
    
 0.902
SFV39771.1
Multidrug resistance ABC transporter ATP-binding and permease protein.
     
0.889
LAC1533_0191
Amino acid ABC transporter substrate-binding protein.
 
 
 0.820
SFV41540.1
Amino acid ABC transporter, amino acid-binding protein.
 
 0.739
Your Current Organism:
Lactobacillus acidipiscis
NCBI taxonomy Id: 89059
Other names: CCUG 42961 [[Lactobacillus cypricasei]], CCUG 46556, CIP 106393 [[Lactobacillus cypricasei]], CIP 106750, DSM 15353 [[Lactobacillus cypricasei]], DSM 15836, JCM 10692, KCTC 13900 [[Lactobacillus cypricasei]], L. acidipiscis, Lactobacillus acidipiscis Tanasupawat et al. 2000, Lactobacillus cypricasei, Lactobacillus cypricasei Lawson et al. 2001, Lactobacillus sp. FS60-1, Lactobacillus sp. FS60-1T, Lactobacillus sp. LMG 17676, Lactobacillus sp. LMK3, NBRC 102163, NRIC 0300, PCU 207, PCU:207, strain FS60-1, strain LMK3 [[Lactobacillus cypricasei]]
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