Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFV40525.1 | SFV40775.1 | LAC1533_1105 | LAC1533_1355 | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | FIG006438: hypothetical protein. | 0.539 |
SFV40713.1 | SFV40775.1 | LAC1533_1293 | LAC1533_1355 | FIG00742757: hypothetical protein. | FIG006438: hypothetical protein. | 0.490 |
SFV40772.1 | SFV40775.1 | LAC1533_1352 | LAC1533_1355 | GTP-binding protein TypA/BipA. | FIG006438: hypothetical protein. | 0.654 |
SFV40772.1 | SFV40776.1 | LAC1533_1352 | LAC1533_1356 | GTP-binding protein TypA/BipA. | L-lactate dehydrogenase. | 0.578 |
SFV40772.1 | suhB | LAC1533_1352 | LAC1533_1354 | GTP-binding protein TypA/BipA. | Inositol-1-monophosphatase. | 0.721 |
SFV40775.1 | SFV40525.1 | LAC1533_1355 | LAC1533_1105 | FIG006438: hypothetical protein. | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.539 |
SFV40775.1 | SFV40713.1 | LAC1533_1355 | LAC1533_1293 | FIG006438: hypothetical protein. | FIG00742757: hypothetical protein. | 0.490 |
SFV40775.1 | SFV40772.1 | LAC1533_1355 | LAC1533_1352 | FIG006438: hypothetical protein. | GTP-binding protein TypA/BipA. | 0.654 |
SFV40775.1 | SFV40776.1 | LAC1533_1355 | LAC1533_1356 | FIG006438: hypothetical protein. | L-lactate dehydrogenase. | 0.918 |
SFV40775.1 | SFV40777.1 | LAC1533_1355 | LAC1533_1357 | FIG006438: hypothetical protein. | Mobile element protein. | 0.537 |
SFV40775.1 | SFV40782.1 | LAC1533_1355 | LAC1533_1362 | FIG006438: hypothetical protein. | Protein of unknown function DUF1447; Belongs to the UPF0356 family. | 0.459 |
SFV40775.1 | SFV40926.1 | LAC1533_1355 | LAC1533_1506 | FIG006438: hypothetical protein. | Possible colicin V production protein. | 0.493 |
SFV40775.1 | SFV41505.1 | LAC1533_1355 | LAC1533_2082 | FIG006438: hypothetical protein. | Cell division protein FtsI [Peptidoglycan synthetase]. | 0.471 |
SFV40775.1 | ezrA | LAC1533_1355 | LAC1533_1410 | FIG006438: hypothetical protein. | Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. | 0.608 |
SFV40775.1 | suhB | LAC1533_1355 | LAC1533_1354 | FIG006438: hypothetical protein. | Inositol-1-monophosphatase. | 0.916 |
SFV40776.1 | SFV40772.1 | LAC1533_1356 | LAC1533_1352 | L-lactate dehydrogenase. | GTP-binding protein TypA/BipA. | 0.578 |
SFV40776.1 | SFV40775.1 | LAC1533_1356 | LAC1533_1355 | L-lactate dehydrogenase. | FIG006438: hypothetical protein. | 0.918 |
SFV40776.1 | SFV40777.1 | LAC1533_1356 | LAC1533_1357 | L-lactate dehydrogenase. | Mobile element protein. | 0.537 |
SFV40776.1 | suhB | LAC1533_1356 | LAC1533_1354 | L-lactate dehydrogenase. | Inositol-1-monophosphatase. | 0.843 |
SFV40777.1 | SFV40775.1 | LAC1533_1357 | LAC1533_1355 | Mobile element protein. | FIG006438: hypothetical protein. | 0.537 |
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