STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV41706.1Glycosyltransferase. (311 aa)    
Predicted Functional Partners:
SFV40787.1
Hypothetical protein.
 
 
 0.840
SFV41416.1
Glycosyl transferase, group 2 family protein.
 
 
 0.814
SFV41707.1
DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase.
  
 
 0.794
SFV41711.1
UDP-glucose 4-epimerase.
 
 
 0.793
SFV41710.1
Undecaprenyl-phosphate galactosephosphotransferase.
 
   
 0.788
SFV41429.1
Glycosyltransferase.
 
 
 0.784
SFV41709.1
Putative N-acetylgalactosaminyl-diphosphoundecaprenol glucuronosyltransferase.
 
 
0.784
LAC1533_2277
UDPglucose 6-dehydrogenase.
  
  
 0.776
SFV41708.1
Glycosyl transferase, group 2 family protein.
 
     0.755
SFV41704.1
Polysaccharide biosynthesis protein CpsM(V).
 
  
 0.735
Your Current Organism:
Lactobacillus acidipiscis
NCBI taxonomy Id: 89059
Other names: CCUG 42961 [[Lactobacillus cypricasei]], CCUG 46556, CIP 106393 [[Lactobacillus cypricasei]], CIP 106750, DSM 15353 [[Lactobacillus cypricasei]], DSM 15836, JCM 10692, KCTC 13900 [[Lactobacillus cypricasei]], L. acidipiscis, Lactobacillus acidipiscis Tanasupawat et al. 2000, Lactobacillus cypricasei, Lactobacillus cypricasei Lawson et al. 2001, Lactobacillus sp. FS60-1, Lactobacillus sp. FS60-1T, Lactobacillus sp. LMG 17676, Lactobacillus sp. LMK3, NBRC 102163, NRIC 0300, PCU 207, PCU:207, strain FS60-1, strain LMK3 [[Lactobacillus cypricasei]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.