STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG09177.1Isoquinoline 1-oxidoreductase, alpha subunit. (151 aa)    
Predicted Functional Partners:
SDG09222.1
Isoquinoline 1-oxidoreductase, beta subunit.
 0.992
SDG12844.1
Isoquinoline 1-oxidoreductase, beta subunit.
 0.973
SDI21521.1
Nicotinate dehydrogenase subunit B.
 0.966
SDG30561.1
CO or xanthine dehydrogenase, Mo-binding subunit.
 0.962
SDG22625.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 0.957
SDG09304.1
Xanthine dehydrogenase accessory factor.
 
 
 0.955
SDI50783.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 0.952
SDI50816.1
Xanthine dehydrogenase YagS FAD-binding subunit.
 
 0.925
SDG22659.1
Xanthine dehydrogenase YagS FAD-binding subunit.
 
 0.922
SDG30494.1
Cytochrome c, mono-and diheme variants.
  
 0.919
Your Current Organism:
Pseudomonas abietaniphila
NCBI taxonomy Id: 89065
Other names: ATCC 700689, CCUG 50779, CIP 106708, P. abietaniphila, strain BKME-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.