Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDG05291.1 | SDG05329.1 | SAMN05216605_10119 | SAMN05216605_10120 | AraC-type DNA-binding protein. | Ethanolamine:proton symporter, EAT family. | 0.508 |
| SDG05291.1 | SDG07739.1 | SAMN05216605_10119 | SAMN05216605_10188 | AraC-type DNA-binding protein. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.473 |
| SDG05291.1 | SDG43872.1 | SAMN05216605_10119 | SAMN05216605_10290 | AraC-type DNA-binding protein. | Transcriptional regulator, AraC family. | 0.404 |
| SDG05291.1 | SDG76236.1 | SAMN05216605_10119 | SAMN05216605_10380 | AraC-type DNA-binding protein. | Glutamate synthase (NADPH) large subunit. | 0.733 |
| SDG05291.1 | SDH20098.1 | SAMN05216605_10119 | SAMN05216605_10547 | AraC-type DNA-binding protein. | Type I phosphodiesterase / nucleotide pyrophosphatase. | 0.410 |
| SDG05291.1 | SDJ15123.1 | SAMN05216605_10119 | SAMN05216605_12241 | AraC-type DNA-binding protein. | Ethanolamine:proton symporter, EAT family. | 0.513 |
| SDG05291.1 | rpoA | SAMN05216605_10119 | SAMN05216605_12649 | AraC-type DNA-binding protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.650 |
| SDG05291.1 | rpoD | SAMN05216605_10119 | SAMN05216605_10455 | AraC-type DNA-binding protein. | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.400 |
| SDG05329.1 | SDG05291.1 | SAMN05216605_10120 | SAMN05216605_10119 | Ethanolamine:proton symporter, EAT family. | AraC-type DNA-binding protein. | 0.508 |
| SDG05329.1 | SDG07739.1 | SAMN05216605_10120 | SAMN05216605_10188 | Ethanolamine:proton symporter, EAT family. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.569 |
| SDG05329.1 | SDG76236.1 | SAMN05216605_10120 | SAMN05216605_10380 | Ethanolamine:proton symporter, EAT family. | Glutamate synthase (NADPH) large subunit. | 0.421 |
| SDG05329.1 | SDH20098.1 | SAMN05216605_10120 | SAMN05216605_10547 | Ethanolamine:proton symporter, EAT family. | Type I phosphodiesterase / nucleotide pyrophosphatase. | 0.423 |
| SDG07739.1 | SDG05291.1 | SAMN05216605_10188 | SAMN05216605_10119 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | AraC-type DNA-binding protein. | 0.473 |
| SDG07739.1 | SDG05329.1 | SAMN05216605_10188 | SAMN05216605_10120 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Ethanolamine:proton symporter, EAT family. | 0.569 |
| SDG07739.1 | SDG43872.1 | SAMN05216605_10188 | SAMN05216605_10290 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Transcriptional regulator, AraC family. | 0.628 |
| SDG07739.1 | SDG76236.1 | SAMN05216605_10188 | SAMN05216605_10380 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Glutamate synthase (NADPH) large subunit. | 0.882 |
| SDG07739.1 | SDJ15123.1 | SAMN05216605_10188 | SAMN05216605_12241 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Ethanolamine:proton symporter, EAT family. | 0.569 |
| SDG07739.1 | rpoA | SAMN05216605_10188 | SAMN05216605_12649 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.847 |
| SDG07739.1 | rpoD | SAMN05216605_10188 | SAMN05216605_10455 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.560 |
| SDG43872.1 | SDG05291.1 | SAMN05216605_10290 | SAMN05216605_10119 | Transcriptional regulator, AraC family. | AraC-type DNA-binding protein. | 0.404 |
page 1 of 3