STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG11803.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (249 aa)    
Predicted Functional Partners:
SDG07739.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 0.974
nuoC
NADH dehydrogenase subunit C /NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
 
 0.923
SDH11949.1
Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein.
  
 0.838
SDG11917.1
Transketolase subunit B.
 
     0.833
SDG11879.1
Transketolase subunit A.
 
     0.812
SDG76236.1
Glutamate synthase (NADPH) large subunit.
     
 0.802
SDH05140.1
Malonate decarboxylase epsilon subunit.
 0.736
SDH35010.1
Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.727
SDI94487.1
[Acyl-carrier-protein] S-malonyltransferase.
 0.720
SDI03572.1
CDP-4-dehydro-6-deoxyglucose reductase.
  
 0.709
Your Current Organism:
Pseudomonas abietaniphila
NCBI taxonomy Id: 89065
Other names: ATCC 700689, CCUG 50779, CIP 106708, P. abietaniphila, strain BKME-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.