Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG07739.1 | SDG16080.1 | SAMN05216605_10188 | SAMN05216605_101305 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | L-glutamine synthetase. | 0.834 |
SDG07739.1 | SDG16168.1 | SAMN05216605_10188 | SAMN05216605_101307 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Gamma-glutamylputrescine oxidase. | 0.808 |
SDG07739.1 | SDG18298.1 | SAMN05216605_10188 | SAMN05216605_101358 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Glycine/D-amino acid oxidase. | 0.808 |
SDG07739.1 | SDG76236.1 | SAMN05216605_10188 | SAMN05216605_10380 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Glutamate synthase (NADPH) large subunit. | 0.882 |
SDG07739.1 | SDG78035.1 | SAMN05216605_10188 | SAMN05216605_103135 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.939 |
SDG07739.1 | SDH60688.1 | SAMN05216605_10188 | SAMN05216605_107137 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Gamma-glutamylputrescine oxidase. | 0.808 |
SDG07739.1 | SDI06532.1 | SAMN05216605_10188 | SAMN05216605_110105 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Gamma-glutamylputrescine oxidase. | 0.808 |
SDG07739.1 | gcvP | SAMN05216605_10188 | SAMN05216605_108203 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.535 |
SDG07739.1 | guaA | SAMN05216605_10188 | SAMN05216605_105317 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.506 |
SDG16080.1 | SDG07739.1 | SAMN05216605_101305 | SAMN05216605_10188 | L-glutamine synthetase. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.834 |
SDG16080.1 | SDG16168.1 | SAMN05216605_101305 | SAMN05216605_101307 | L-glutamine synthetase. | Gamma-glutamylputrescine oxidase. | 0.944 |
SDG16080.1 | SDG18298.1 | SAMN05216605_101305 | SAMN05216605_101358 | L-glutamine synthetase. | Glycine/D-amino acid oxidase. | 0.849 |
SDG16080.1 | SDG76236.1 | SAMN05216605_101305 | SAMN05216605_10380 | L-glutamine synthetase. | Glutamate synthase (NADPH) large subunit. | 0.943 |
SDG16080.1 | SDG78035.1 | SAMN05216605_101305 | SAMN05216605_103135 | L-glutamine synthetase. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.845 |
SDG16080.1 | SDH60688.1 | SAMN05216605_101305 | SAMN05216605_107137 | L-glutamine synthetase. | Gamma-glutamylputrescine oxidase. | 0.850 |
SDG16080.1 | SDI06532.1 | SAMN05216605_101305 | SAMN05216605_110105 | L-glutamine synthetase. | Gamma-glutamylputrescine oxidase. | 0.853 |
SDG16080.1 | SDJ02908.1 | SAMN05216605_101305 | SAMN05216605_120102 | L-glutamine synthetase. | Gamma-glutamyl-gamma-aminobutyrate hydrolase. | 0.872 |
SDG16080.1 | gcvP | SAMN05216605_101305 | SAMN05216605_108203 | L-glutamine synthetase. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.804 |
SDG16080.1 | guaA | SAMN05216605_101305 | SAMN05216605_105317 | L-glutamine synthetase. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.859 |
SDG16168.1 | SDG07739.1 | SAMN05216605_101307 | SAMN05216605_10188 | Gamma-glutamylputrescine oxidase. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.808 |
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