Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG23804.1 | SDG23844.1 | SAMN05216605_101490 | SAMN05216605_101491 | Phosphonate transport system substrate-binding protein. | Phosphonate transport system permease protein. | 0.996 |
SDG23804.1 | SDG23885.1 | SAMN05216605_101490 | SAMN05216605_101492 | Phosphonate transport system substrate-binding protein. | Transcriptional regulator, GntR family. | 0.982 |
SDG23804.1 | SDG23926.1 | SAMN05216605_101490 | SAMN05216605_101493 | Phosphonate transport system substrate-binding protein. | alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG. | 0.980 |
SDG23804.1 | SDG23963.1 | SAMN05216605_101490 | SAMN05216605_101494 | Phosphonate transport system substrate-binding protein. | alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH. | 0.984 |
SDG23804.1 | SDG23997.1 | SAMN05216605_101490 | SAMN05216605_101495 | Phosphonate transport system substrate-binding protein. | alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI. | 0.990 |
SDG23804.1 | SDG24041.1 | SAMN05216605_101490 | SAMN05216605_101496 | Phosphonate transport system substrate-binding protein. | alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family. | 0.991 |
SDG23804.1 | SDG24115.1 | SAMN05216605_101490 | SAMN05216605_101498 | Phosphonate transport system substrate-binding protein. | alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL. | 0.992 |
SDG23804.1 | SDG24167.1 | SAMN05216605_101490 | SAMN05216605_101499 | Phosphonate transport system substrate-binding protein. | alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase. | 0.946 |
SDG23804.1 | SDJ35746.1 | SAMN05216605_101490 | SAMN05216605_12729 | Phosphonate transport system substrate-binding protein. | Phosphonate transport system substrate-binding protein. | 0.825 |
SDG23804.1 | phnC | SAMN05216605_101490 | SAMN05216605_101489 | Phosphonate transport system substrate-binding protein. | Phosphonate transport system ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | 0.996 |
SDG23844.1 | SDG23804.1 | SAMN05216605_101491 | SAMN05216605_101490 | Phosphonate transport system permease protein. | Phosphonate transport system substrate-binding protein. | 0.996 |
SDG23844.1 | SDG23885.1 | SAMN05216605_101491 | SAMN05216605_101492 | Phosphonate transport system permease protein. | Transcriptional regulator, GntR family. | 0.904 |
SDG23844.1 | SDG23926.1 | SAMN05216605_101491 | SAMN05216605_101493 | Phosphonate transport system permease protein. | alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG. | 0.915 |
SDG23844.1 | SDG23963.1 | SAMN05216605_101491 | SAMN05216605_101494 | Phosphonate transport system permease protein. | alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH. | 0.952 |
SDG23844.1 | SDG23997.1 | SAMN05216605_101491 | SAMN05216605_101495 | Phosphonate transport system permease protein. | alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI. | 0.959 |
SDG23844.1 | SDG24041.1 | SAMN05216605_101491 | SAMN05216605_101496 | Phosphonate transport system permease protein. | alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family. | 0.930 |
SDG23844.1 | SDG24115.1 | SAMN05216605_101491 | SAMN05216605_101498 | Phosphonate transport system permease protein. | alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL. | 0.953 |
SDG23844.1 | SDG24167.1 | SAMN05216605_101491 | SAMN05216605_101499 | Phosphonate transport system permease protein. | alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase. | 0.921 |
SDG23844.1 | SDJ35746.1 | SAMN05216605_101491 | SAMN05216605_12729 | Phosphonate transport system permease protein. | Phosphonate transport system substrate-binding protein. | 0.912 |
SDG23844.1 | phnC | SAMN05216605_101491 | SAMN05216605_101489 | Phosphonate transport system permease protein. | Phosphonate transport system ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | 0.986 |
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