Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG24468.1 | SDG29139.1 | SAMN05216605_101507 | SAMN05216605_101634 | Thioredoxin 1. | Peptide-methionine (R)-S-oxide reductase. | 0.495 |
SDG24468.1 | msrA | SAMN05216605_101507 | SAMN05216605_101632 | Thioredoxin 1. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.799 |
SDG24468.1 | msrB | SAMN05216605_101507 | SAMN05216605_11931 | Thioredoxin 1. | Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family. | 0.495 |
SDG29103.1 | SDG29139.1 | SAMN05216605_101633 | SAMN05216605_101634 | Cytochrome c biogenesis protein CcdA. | Peptide-methionine (R)-S-oxide reductase. | 0.809 |
SDG29103.1 | SDJ42507.1 | SAMN05216605_101633 | SAMN05216605_12926 | Cytochrome c biogenesis protein CcdA. | Cytochrome c biogenesis protein CcdA. | 0.682 |
SDG29103.1 | msrA | SAMN05216605_101633 | SAMN05216605_101632 | Cytochrome c biogenesis protein CcdA. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.966 |
SDG29103.1 | msrB | SAMN05216605_101633 | SAMN05216605_11931 | Cytochrome c biogenesis protein CcdA. | Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family. | 0.693 |
SDG29139.1 | SDG24468.1 | SAMN05216605_101634 | SAMN05216605_101507 | Peptide-methionine (R)-S-oxide reductase. | Thioredoxin 1. | 0.495 |
SDG29139.1 | SDG29103.1 | SAMN05216605_101634 | SAMN05216605_101633 | Peptide-methionine (R)-S-oxide reductase. | Cytochrome c biogenesis protein CcdA. | 0.809 |
SDG29139.1 | SDG46584.1 | SAMN05216605_101634 | SAMN05216605_102164 | Peptide-methionine (R)-S-oxide reductase. | Thiol-disulfide isomerase or thioredoxin. | 0.598 |
SDG29139.1 | SDG46750.1 | SAMN05216605_101634 | SAMN05216605_102168 | Peptide-methionine (R)-S-oxide reductase. | Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE. | 0.495 |
SDG29139.1 | SDH34813.1 | SAMN05216605_101634 | SAMN05216605_10628 | Peptide-methionine (R)-S-oxide reductase. | Thiol-disulfide isomerase or thioredoxin. | 0.598 |
SDG29139.1 | SDH39506.1 | SAMN05216605_101634 | SAMN05216605_106130 | Peptide-methionine (R)-S-oxide reductase. | Thiol-disulfide isomerase or thioredoxin. | 0.495 |
SDG29139.1 | SDJ42507.1 | SAMN05216605_101634 | SAMN05216605_12926 | Peptide-methionine (R)-S-oxide reductase. | Cytochrome c biogenesis protein CcdA. | 0.693 |
SDG29139.1 | msrA | SAMN05216605_101634 | SAMN05216605_101632 | Peptide-methionine (R)-S-oxide reductase. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.990 |
SDG29139.1 | polA | SAMN05216605_101634 | SAMN05216605_11898 | Peptide-methionine (R)-S-oxide reductase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.437 |
SDG46584.1 | SDG29139.1 | SAMN05216605_102164 | SAMN05216605_101634 | Thiol-disulfide isomerase or thioredoxin. | Peptide-methionine (R)-S-oxide reductase. | 0.598 |
SDG46584.1 | SDG46750.1 | SAMN05216605_102164 | SAMN05216605_102168 | Thiol-disulfide isomerase or thioredoxin. | Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE. | 0.617 |
SDG46584.1 | msrA | SAMN05216605_102164 | SAMN05216605_101632 | Thiol-disulfide isomerase or thioredoxin. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.843 |
SDG46584.1 | msrB | SAMN05216605_102164 | SAMN05216605_11931 | Thiol-disulfide isomerase or thioredoxin. | Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family. | 0.598 |
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