Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG05693.1 | SDG44276.1 | SAMN05216605_10130 | SAMN05216605_102101 | Di-haem cytochrome c peroxidase. | 40-residue YVTN family beta-propeller repeat-containing protein. | 0.926 |
SDG05693.1 | SDG54670.1 | SAMN05216605_10130 | SAMN05216605_102382 | Di-haem cytochrome c peroxidase. | Cytochrome P460. | 0.469 |
SDG05693.1 | SDH94230.1 | SAMN05216605_10130 | SAMN05216605_109157 | Di-haem cytochrome c peroxidase. | Cytochrome P460. | 0.420 |
SDG05693.1 | SDI17886.1 | SAMN05216605_10130 | SAMN05216605_11143 | Di-haem cytochrome c peroxidase. | Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.642 |
SDG07739.1 | SDG18903.1 | SAMN05216605_10188 | SAMN05216605_101373 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Quinohemoprotein ethanol dehydrogenase. | 0.814 |
SDG07739.1 | SDG44276.1 | SAMN05216605_10188 | SAMN05216605_102101 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 40-residue YVTN family beta-propeller repeat-containing protein. | 0.905 |
SDG07739.1 | SDG76236.1 | SAMN05216605_10188 | SAMN05216605_10380 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Glutamate synthase (NADPH) large subunit. | 0.882 |
SDG07739.1 | SDI17886.1 | SAMN05216605_10188 | SAMN05216605_11143 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.448 |
SDG18903.1 | SDG07739.1 | SAMN05216605_101373 | SAMN05216605_10188 | Quinohemoprotein ethanol dehydrogenase. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.814 |
SDG18903.1 | SDG24740.1 | SAMN05216605_101373 | SAMN05216605_101514 | Quinohemoprotein ethanol dehydrogenase. | Cytochrome c-550 PedF. | 0.413 |
SDG18903.1 | SDG44276.1 | SAMN05216605_101373 | SAMN05216605_102101 | Quinohemoprotein ethanol dehydrogenase. | 40-residue YVTN family beta-propeller repeat-containing protein. | 0.935 |
SDG18903.1 | SDG76236.1 | SAMN05216605_101373 | SAMN05216605_10380 | Quinohemoprotein ethanol dehydrogenase. | Glutamate synthase (NADPH) large subunit. | 0.765 |
SDG18903.1 | SDI17886.1 | SAMN05216605_101373 | SAMN05216605_11143 | Quinohemoprotein ethanol dehydrogenase. | Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.812 |
SDG24740.1 | SDG18903.1 | SAMN05216605_101514 | SAMN05216605_101373 | Cytochrome c-550 PedF. | Quinohemoprotein ethanol dehydrogenase. | 0.413 |
SDG24740.1 | SDG44276.1 | SAMN05216605_101514 | SAMN05216605_102101 | Cytochrome c-550 PedF. | 40-residue YVTN family beta-propeller repeat-containing protein. | 0.802 |
SDG24740.1 | SDG76236.1 | SAMN05216605_101514 | SAMN05216605_10380 | Cytochrome c-550 PedF. | Glutamate synthase (NADPH) large subunit. | 0.747 |
SDG44276.1 | SDG05693.1 | SAMN05216605_102101 | SAMN05216605_10130 | 40-residue YVTN family beta-propeller repeat-containing protein. | Di-haem cytochrome c peroxidase. | 0.926 |
SDG44276.1 | SDG07739.1 | SAMN05216605_102101 | SAMN05216605_10188 | 40-residue YVTN family beta-propeller repeat-containing protein. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.905 |
SDG44276.1 | SDG18903.1 | SAMN05216605_102101 | SAMN05216605_101373 | 40-residue YVTN family beta-propeller repeat-containing protein. | Quinohemoprotein ethanol dehydrogenase. | 0.935 |
SDG44276.1 | SDG24740.1 | SAMN05216605_102101 | SAMN05216605_101514 | 40-residue YVTN family beta-propeller repeat-containing protein. | Cytochrome c-550 PedF. | 0.802 |
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