STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG44276.140-residue YVTN family beta-propeller repeat-containing protein. (485 aa)    
Predicted Functional Partners:
SDG18903.1
Quinohemoprotein ethanol dehydrogenase.
 
 0.935
SDG05693.1
Di-haem cytochrome c peroxidase.
  
 
 0.926
SDG44309.1
Protein of unknown function.
 
   
 0.923
SDI17886.1
Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 0.912
SDG07739.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 
 0.905
SDH94230.1
Cytochrome P460.
 
 0.879
SDG54670.1
Cytochrome P460.
 
 0.855
SDG82159.1
Azurin; Transfers electrons from cytochrome c551 to cytochrome oxidase.
    
 
 0.853
SDG24740.1
Cytochrome c-550 PedF.
 
 0.802
SDG76236.1
Glutamate synthase (NADPH) large subunit.
    
  0.796
Your Current Organism:
Pseudomonas abietaniphila
NCBI taxonomy Id: 89065
Other names: ATCC 700689, CCUG 50779, CIP 106708, P. abietaniphila, strain BKME-9
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