STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG44952.1Succinylglutamate desuccinylase / Aspartoacylase family protein. (334 aa)    
Predicted Functional Partners:
SDG78035.1
L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
  0.732
SDG44921.1
MFS transporter, MHS family, proline/betaine transporter.
       0.581
SDG51967.1
2-keto-4-pentenoate hydratase.
  
     0.548
SDG44992.1
Acetyltransferase (GNAT) family protein.
       0.486
SDG12417.1
Microcystin degradation protein MlrC, contains DUF1485 domain; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.
 
     0.468
SDI45466.1
Hypothetical protein.
 
     0.422
SDI93443.1
Predicted metal-dependent enzyme of the double-stranded beta helix superfamily.
  
     0.404
Your Current Organism:
Pseudomonas abietaniphila
NCBI taxonomy Id: 89065
Other names: ATCC 700689, CCUG 50779, CIP 106708, P. abietaniphila, strain BKME-9
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