Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG14705.1 | SDG41867.1 | SAMN05216605_101271 | SAMN05216605_10230 | L-serine ammonia-lyase. | Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. | 0.643 |
SDG14705.1 | SDG45468.1 | SAMN05216605_101271 | SAMN05216605_102134 | L-serine ammonia-lyase. | D-serine deaminase, pyridoxal phosphate-dependent. | 0.633 |
SDG14705.1 | SDH28551.1 | SAMN05216605_101271 | SAMN05216605_105292 | L-serine ammonia-lyase. | L-threonine synthase. | 0.819 |
SDG41867.1 | SDG14705.1 | SAMN05216605_10230 | SAMN05216605_101271 | Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. | L-serine ammonia-lyase. | 0.643 |
SDG41867.1 | SDG45468.1 | SAMN05216605_10230 | SAMN05216605_102134 | Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. | D-serine deaminase, pyridoxal phosphate-dependent. | 0.587 |
SDG41867.1 | SDI17117.1 | SAMN05216605_10230 | SAMN05216605_11121 | Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. | Antibiotic biosynthesis monooxygenase. | 0.466 |
SDG45381.1 | SDG45414.1 | SAMN05216605_102132 | SAMN05216605_102133 | Reactive intermediate/imine deaminase. | Transcriptional regulator, IclR family. | 0.615 |
SDG45381.1 | SDG45468.1 | SAMN05216605_102132 | SAMN05216605_102134 | Reactive intermediate/imine deaminase. | D-serine deaminase, pyridoxal phosphate-dependent. | 0.729 |
SDG45381.1 | SDG45491.1 | SAMN05216605_102132 | SAMN05216605_102135 | Reactive intermediate/imine deaminase. | 2-keto-3-deoxygluconate kinase. | 0.543 |
SDG45381.1 | SDH94820.1 | SAMN05216605_102132 | SAMN05216605_109174 | Reactive intermediate/imine deaminase. | N-acyl-D-glutamate deacylase/N-acyl-D-amino-acid deacylase. | 0.418 |
SDG45414.1 | SDG45381.1 | SAMN05216605_102133 | SAMN05216605_102132 | Transcriptional regulator, IclR family. | Reactive intermediate/imine deaminase. | 0.615 |
SDG45414.1 | SDG45468.1 | SAMN05216605_102133 | SAMN05216605_102134 | Transcriptional regulator, IclR family. | D-serine deaminase, pyridoxal phosphate-dependent. | 0.775 |
SDG45414.1 | SDG45491.1 | SAMN05216605_102133 | SAMN05216605_102135 | Transcriptional regulator, IclR family. | 2-keto-3-deoxygluconate kinase. | 0.760 |
SDG45468.1 | SDG14705.1 | SAMN05216605_102134 | SAMN05216605_101271 | D-serine deaminase, pyridoxal phosphate-dependent. | L-serine ammonia-lyase. | 0.633 |
SDG45468.1 | SDG41867.1 | SAMN05216605_102134 | SAMN05216605_10230 | D-serine deaminase, pyridoxal phosphate-dependent. | Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. | 0.587 |
SDG45468.1 | SDG45381.1 | SAMN05216605_102134 | SAMN05216605_102132 | D-serine deaminase, pyridoxal phosphate-dependent. | Reactive intermediate/imine deaminase. | 0.729 |
SDG45468.1 | SDG45414.1 | SAMN05216605_102134 | SAMN05216605_102133 | D-serine deaminase, pyridoxal phosphate-dependent. | Transcriptional regulator, IclR family. | 0.775 |
SDG45468.1 | SDG45491.1 | SAMN05216605_102134 | SAMN05216605_102135 | D-serine deaminase, pyridoxal phosphate-dependent. | 2-keto-3-deoxygluconate kinase. | 0.827 |
SDG45468.1 | SDH28551.1 | SAMN05216605_102134 | SAMN05216605_105292 | D-serine deaminase, pyridoxal phosphate-dependent. | L-threonine synthase. | 0.670 |
SDG45468.1 | SDH42730.1 | SAMN05216605_102134 | SAMN05216605_106198 | D-serine deaminase, pyridoxal phosphate-dependent. | PhnB protein. | 0.629 |
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